Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1791 ATGGCTTCTTTCACTCTCAAACTCTTCCTCCTTCTCGTCTTCACCTCCTACACTTTCGCATCTTCTCCTCCATCATCATCATCATCATTATCATCAACACTTGATCCAAATCTCACTTCCATCAGATCTTTCTGCAAAACCACCCCATACCCACAAACTTGCTTCAATTCTTTAAAGCTTGGAATTTCCATCAACATTAGCCCAAACATCCTCACCTACCTTCTTCAATCTCTTCAAGTCGCCATCTCCGAAGCCACCCATCTCTCCGATCTCTTCCACAATGCTGGCGGCGGCGGCGGTTCTGGTTCTTCAAATCTTGTGGAGAAACAGAGAGGGTCGATTCAAGATTGTAGGGAGCTTCATCTTTCAACATTGACCTCACTCAAAAGATCACTATCTGGTGTTCGTGATTCTCCTACTTCTTCCAGAAAGCTTGCTAATGCCAGAGCCTACCTTAGCGCCGCCATGACCAACAAGAACACTTGCCTTGAGGGTCTTGACTCTGCTACGGGCTCCCTCAAGCCCCTTCTCGTGGACTCCACCATTGAAGCCTACAAACATGTCAGCAACTCCCTCTCCATGCTCCCTCAACCAGAGTTTGGAGGTTCAAGAGGACATAAGAACAGGCGGCGTTTGCTGGGAGCTCCGGCGTGGCTAAAGAAAGGAGACCGTCGGATCTTGGACGGTGGACAATTAAATGATGATATGATCGTGGTGGCCGCAGATGGAAGTGGCAATTTCAGCACAATTAGTGAAGCAGTGAACTTTGCTCCCAATAATAGCTTGTACAGGACAATGATATATGTGAAGGCAGGAACCTACAAGGAAAATGTGGAGATCCCAAGTTATAAAACCAACCTTGTTCTTCTTGGAGATGGAAGTGATGTCACTCTCATCACTGGTCATAGAAGTGTGGGCGATGGCTGGACCACTTTCAGATCTGCAACTCTAGCTGTGTCCGGTGATGGGTTTCTGGCACGAGACATAGCAATAGAGAACAGTGCAGGGCCAGAAAAGCACCAAGCAGTAGCTCTAAGGATAAACGCGGACTTAACGGCGTTATACAAATGCGCCGTTTATGGCTACCAAGACACACTCTACGTCCATTCCTTCCGTCAATTCTACAGAGAATGTGACATATATGGCACCATTGACTTCATATTCGGTAACGCCGCCGTCGTTTTCCAAGACTGCGACGTCGTTTCGAGGAAACCAATGCCTCACCAATTCACCGTTATCACGGCTCAGTCACGTGACTCGCCAGATGAGGACACCGGAATTTCATTCCAGAATTGCTCCATTATAGCCACCCAAGATCTCTATAATAGCTCTAATAATAACAGCTTCAAAAGCTACCTAGGACGACCATGGAGGCCTTATTCTCGTACAGTGTACCTTGAATCTTACATTGATGACTTTGTTGACCCAAAAGGGTGGACTGAGTGGTCGGATCCTGATGGGGATGATACTGAGACTGTGTACTATGGGGAGTATCAGAATTATGGGCCGGGTTCGGGTACGGGTGGTAGGGTGGATTGGGCCGGGTATCATGTGATGGGCTATGATGAAGCTTATAATTTTACTGTTACTCCCTTCATTATGGGTGATGCTTGGCTTCAGTCCACTTCATTCCCTTATGATGCTGGCATTTAA 1653 0.4713 MASFTLKLFLLLVFTSYTFASSPPSSSSSLSSTLDPNLTSIRSFCKTTPYPQTCFNSLKLGISINISPNILTYLLQSLQVAISEATHLSDLFHNAGGGGGSGSSNLVEKQRGSIQDCRELHLSTLTSLKRSLSGVRDSPTSSRKLANARAYLSAAMTNKNTCLEGLDSATGSLKPLLVDSTIEAYKHVSNSLSMLPQPEFGGSRGHKNRRRLLGAPAWLKKGDRRILDGGQLNDDMIVVAADGSGNFSTISEAVNFAPNNSLYRTMIYVKAGTYKENVEIPSYKTNLVLLGDGSDVTLITGHRSVGDGWTTFRSATLAVSGDGFLARDIAIENSAGPEKHQAVALRINADLTALYKCAVYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVFQDCDVVSRKPMPHQFTVITAQSRDSPDEDTGISFQNCSIIATQDLYNSSNNNSFKSYLGRPWRPYSRTVYLESYIDDFVDPKGWTEWSDPDGDDTETVYYGEYQNYGPGSGTGGRVDWAGYHVMGYDEAYNFTVTPFIMGDAWLQSTSFPYDAGI 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1791 550 SMART PMEI_2 36 194 IPR006501 GO:0004857
Mibi09g1791 550 FunFam Pectinesterase 231 550 - -
Mibi09g1791 550 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 194 IPR006501 GO:0004857
Mibi09g1791 550 Pfam Plant invertase/pectin methylesterase inhibitor 40 194 IPR006501 GO:0004857
Mibi09g1791 550 CDD PMEI-like_3 43 194 - -
Mibi09g1791 550 Gene3D - 232 550 IPR012334 -
Mibi09g1791 550 PANTHER PECTINESTERASE 14 540 - -
Mibi09g1791 550 Pfam Pectinesterase 237 536 IPR000070 GO:0030599|GO:0042545
Mibi09g1791 550 FunFam Pectinesterase 37 197 - -
Mibi09g1791 550 SUPERFAMILY Pectin lyase-like 235 548 IPR011050 -
Mibi09g1791 550 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 197 IPR035513 -
Mibi09g1791 550 ProSitePatterns Pectinesterase signature 2. 380 389 IPR033131 -
Mibi09g1791 550 ProSitePatterns Pectinesterase signature 1. 261 280 IPR018040 -
Mibi09g1791 550 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 195 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1791 Mibi-ChrMibi09 36639682 36642823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1791 22 550 Carbohydrate Esterase AT2G26440 64.880 0.0 696