Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1790 ATGGCTCTTTCTTATTCAACCAAAATGGTGCATGCAACAAATCACATGTCGTTTATATTATTGTCGATGATAGTGATTATGGGTGTGTTGAGTCCAATTTGTGAAGCTGGTGGCAGTGAGGTGAAGGGGTTAGAATGGTTGAAGGTTTCTTCTTCAGATTTCAGAGATTCTGTTCAAGGAGTCATTCATGTTTTGCAGCATGTTTCCTTCATCTTGTCCAGGTTTCCCAATGGACGAGATTTTCGTCTCTCCAATGCCATTTCTGACTGCCTTGACTTACTTGATTTGTCTTTTGATGCTCTTCAGTTGTCTTCCTCTGCCACTGAGACTCCCATAGGCCAGAAAAACGGCACAGGGAATTTGGGCTCTGATCTGAGAACATGGCTGAGTGCTGCATTAGCAAATCCACAGACATGCATGGAAGGTTTTGAAGGAATCAATAGCACTGTGGAAAATCTGGTATCATCTCTTCTAAGTCAAATGATCTCATCGATCCAGGAACTCCTATCCCAGGTTCACCATGAACCGGACGACTTCCCTACAAGCAAGGTAAGGTTCCCTTCATGGATCAAACCAAGTGACCAGAAGATCCTAAAGTCAAAAGAGATTAATGCAGATATTGTAGTAGCAGCTGATGGAAGTGGGACTTTTACTAGTATAGCAGATGCAGTGGAAGCAGCTCCTAATTATAGCATGAAACGTTTTGTGATATATGTAAAGAGCGGTATTTACAAGGAGAATGTGGAAATCAAGAAGAAGAAATGGAACATCATGATGATTGGTGAAGGCATGGATTCCACTGTTATCTCCGGTAATCGGAATTTCATCGATGGTTGGACCACTTACCGATCGGCTACTTTCGGCGTTAGCGGGAGAGGATTCATAGCAAGAGACATTACCTTCCAGAACACGGCAGGTCCATATAAGCACCAAGCAGTGGCACTAAGATCAGACTCGGATCTATCAGTCTTCTACCGTTGTGGTATCTATGGTTACCAAGACAGCCTCTTCACACACACAATGCGTCAATTTTTCAGAGAATGCATAATAAAAGGCACAGTTGATTTCATCTTCGGAGATGCCACAGTAGTGTTACAAAAATGCCAGATTCTAGCCAAGAAAGGCCTTCCAGGTCAGAAAAACGCAATCACAGCTCAAGGAAGAAAAGACCCACATGAACCAACTGGTTTCTCAATCCAATTCTGCAAAATCTCTGCAGATTCTGACCTTCTTCCTTATGTGGGGTCCACTGAAACATACTTGGGGAGGCCATGGAAGCCGTTTTCACGAACAGTTTATATGCAAACTTATATGAGTGACTTGGTGGATCCACAAGGATGGCTAGAGTGGAATGGGGATAATTCTTCTGTTAAAACTGTTTATTATGCAGAGTATATGAATGTTGGTCCAGGATCTGCGCTTGAGAATCGAGTGAAATGGCCTGGGTATCATGTGTTGAAGGATGCTAAACAGGCTTATTTCTTCACCGTGGCTAATTTTCTTGAAGGCAATTTATGGCTGCCTCACACTGGTGTTATGTACACAGCTGGTTTAAGCGCTTGA 1563 0.4293 MALSYSTKMVHATNHMSFILLSMIVIMGVLSPICEAGGSEVKGLEWLKVSSSDFRDSVQGVIHVLQHVSFILSRFPNGRDFRLSNAISDCLDLLDLSFDALQLSSSATETPIGQKNGTGNLGSDLRTWLSAALANPQTCMEGFEGINSTVENLVSSLLSQMISSIQELLSQVHHEPDDFPTSKVRFPSWIKPSDQKILKSKEINADIVVAADGSGTFTSIADAVEAAPNYSMKRFVIYVKSGIYKENVEIKKKKWNIMMIGEGMDSTVISGNRNFIDGWTTYRSATFGVSGRGFIARDITFQNTAGPYKHQAVALRSDSDLSVFYRCGIYGYQDSLFTHTMRQFFRECIIKGTVDFIFGDATVVLQKCQILAKKGLPGQKNAITAQGRKDPHEPTGFSIQFCKISADSDLLPYVGSTETYLGRPWKPFSRTVYMQTYMSDLVDPQGWLEWNGDNSSVKTVYYAEYMNVGPGSALENRVKWPGYHVLKDAKQAYFFTVANFLEGNLWLPHTGVMYTAGLSA 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1790 520 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 173 IPR035513 -
Mibi09g1790 520 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 63 157 IPR035513 -
Mibi09g1790 520 CDD PMEI-like_4 15 173 - -
Mibi09g1790 520 Pfam Pectinesterase 206 504 IPR000070 GO:0030599|GO:0042545
Mibi09g1790 520 FunFam Pectinesterase 200 518 - -
Mibi09g1790 520 PANTHER PECTINESTERASE 57 508 - -
Mibi09g1790 520 SMART PMEI_2 25 160 IPR006501 GO:0004857
Mibi09g1790 520 Gene3D - 200 518 IPR012334 -
Mibi09g1790 520 ProSitePatterns Pectinesterase signature 2. 350 359 IPR033131 -
Mibi09g1790 520 SUPERFAMILY Pectin lyase-like 204 517 IPR011050 -
Mibi09g1790 520 ProSitePatterns Pectinesterase signature 1. 231 250 IPR018040 -
Mibi09g1790 520 Pfam Plant invertase/pectin methylesterase inhibitor 80 163 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1790 Mibi-ChrMibi09 36626846 36629915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1790 17 518 Carbohydrate Esterase AT3G43270 56.950 0.0 620