Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1773 ATGAGAGTAGGAGAAGAAATCGATGGCCAGCAAACTCAGTCATCATCATCTTCTTCTTCTTCAATTGATAGCAGTAATTACCCTTTTGGGACTGTGAAACTTGCAGCTCCTTCTTCATCATCATCATCATCTACTTCCTCTCACTCTTCCTCTTCGTCTCTCTCAAGTGTTTGTAGAAATGCCACTAACAGTTCCAGAACTGATTTGATCACTGACCTCAGACTTGGTCTTACCATTTCTCCTTCTCAACCTGGTTTTCCCAATTCAAATCCCAGGTCAAGGAATCAAACTTCAGATTGGCCTCCAATAAAGTCAATACTGAGAAGCACTCTTGTGGAGAAGCAAAACCAATGGAGCCAAAAGCCTTCCTTATTTGTGAAAGTGTACATGGAAGGAATACCCATTGGTAGAAAATTGAACCTTCTGGCTCACCATAGTTATGATGGGCTTGTCAGATCCCTAGGCCACATGTTCAGGACCACCATTCTCTGCCCTAATTCCCAACCAGTCCATTCTGGAAATTTTCACGTGTTAACTTATGAGGATCAAGAAGGTGACTGGATGATGGTTGGAGATGTGCCTTGGGAGATGTTCTTGACCAGTGTGAAAAGGCTGAAGATCACCAGAGCAGACAGATGCTAG 642 0.433 MRVGEEIDGQQTQSSSSSSSSIDSSNYPFGTVKLAAPSSSSSSSTSSHSSSSSLSSVCRNATNSSRTDLITDLRLGLTISPSQPGFPNSNPRSRNQTSDWPPIKSILRSTLVEKQNQWSQKPSLFVKVYMEGIPIGRKLNLLAHHSYDGLVRSLGHMFRTTILCPNSQPVHSGNFHVLTYEDQEGDWMMVGDVPWEMFLTSVKRLKITRADRC 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1773 213 Gene3D - 118 213 - -
Mibi09g1773 213 ProSiteProfiles PB1 domain profile. 123 212 IPR000270 GO:0005515
Mibi09g1773 213 MobiDBLite consensus disorder prediction 78 101 - -
Mibi09g1773 213 SUPERFAMILY CAD & PB1 domains 116 207 - -
Mibi09g1773 213 MobiDBLite consensus disorder prediction 7 58 - -
Mibi09g1773 213 MobiDBLite consensus disorder prediction 1 58 - -
Mibi09g1773 213 Pfam AUX/IAA family 19 209 IPR033389 -
Mibi09g1773 213 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 70 211 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1773 Mibi-ChrMibi09 36442315 36443611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1773 126 213 B3 DNA Binding Superfamily AT2G46530 34.831 1.94e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi09g1773 AUX_IAA 3e-34 CL0072