Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1746 ATGAGTCTCTGTACTAAAAAGAGGATCATGGGTTGCTTTAGCTGTTGCGAAGATGACGATGTTCAAACACATGCTGACAATAAAACTTACATGCAAAGCAATGCTGCAGGGAGAAATGGCTATCCTGGAAGAGAGGCTGTTGCAAGAACCACTCCACCTACTGTACATTTTCAGCCTATTGCCGTCCCTTCCCTTTCAGTTGATGAATTAAAGTCCGTGACCGATAATTTTGGCATGAAATCGTTCATTGGGGAGGGTGCATATGGCAAAGTTTATCATGCCATATTGAGAAATGGCCGCGCCGTGGCTATAAAAAAGTTGGATTCTAGTAAGCAACCAGAACAAGAGTTTCTTGCACAGGTCTCTATTGTATCAAGGTTAAGGCATGAAAATGTTATTGAACTTGTTGGTTATTGCGTCGAGGGTCCTTTTCGTGCCCTAGCTTATGAGTATGCTCCTAAAGGATCACTTCATGACATCCTACATGGACGCAAGGGCGATAAGGATGCACATCCTGGTCCAGTTCTATCTTGGACAAGGAGAGTTAAAATTGCTGTTGGAGCGGCTAAAGGACTAGAATATCTTCATGAAAAAGCAGAGAAACATATCATCCATCGCTACATCAAGTCTAGCAATATACTGCTTTTTGATGATGATGTTTCGAAGATTGCTGATTTCGATTTGTCAAATCAAGCCCCTGACGAAGTAGCTCGTGTCCATTCTACTCGTGTTCTTGGAACCTTTGGTTATTATGCTCCAGAATTTGCTATGACGGGAGATCTCACTATAAAGAGTGATGTTTATAGTTTTGGAGTGATATTGTTGGAACTATTAACAGGGCGTAAGCCGGTTGACCATACGCTGCCGCGAGGGCAACAAAGCCTAGTGACTTGGGCAACACCAAAACTCAGTGAAGATAAGGTAAAGCAGTGTGTGGATGCCAGATTACAGGAAGATTACCCTCCAAAAGCAGTTGCCAAGATGGCTGCTGTTGCTGCATTGTGTCTGCAATATGAAGCAGGGTTAAGGCCAAACATGAGCATTGTAGTTAAAGCATTACAACCTCTGTTAAATCCTCGTCCTCAGCCAAAAGAAAAGTATTGA 1104 0.4284 MSLCTKKRIMGCFSCCEDDDVQTHADNKTYMQSNAAGRNGYPGREAVARTTPPTVHFQPIAVPSLSVDELKSVTDNFGMKSFIGEGAYGKVYHAILRNGRAVAIKKLDSSKQPEQEFLAQVSIVSRLRHENVIELVGYCVEGPFRALAYEYAPKGSLHDILHGRKGDKDAHPGPVLSWTRRVKIAVGAAKGLEYLHEKAEKHIIHRYIKSSNILLFDDDVSKIADFDLSNQAPDEVARVHSTRVLGTFGYYAPEFAMTGDLTIKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDARLQEDYPPKAVAKMAAVAALCLQYEAGLRPNMSIVVKALQPLLNPRPQPKEKY 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1746 367 SUPERFAMILY Protein kinase-like (PK-like) 53 353 IPR011009 -
Mibi09g1746 367 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Mibi09g1746 367 Pfam Protein tyrosine and serine/threonine kinase 80 353 IPR001245 GO:0004672|GO:0006468
Mibi09g1746 367 FunFam pto-interacting protein 1 153 364 - -
Mibi09g1746 367 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 13 362 - -
Mibi09g1746 367 Gene3D Phosphorylase Kinase; domain 1 44 151 - -
Mibi09g1746 367 PIRSF ILK 17 361 - -
Mibi09g1746 367 Gene3D Transferase(Phosphotransferase) domain 1 153 365 - -
Mibi09g1746 367 ProSiteProfiles Protein kinase domain profile. 77 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1746 367 CDD STKc_IRAK 83 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1746 Mibi-ChrMibi09 36082799 36089460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1746 58 354 Receptor kinase-like Gene Family AT4G02010 48.505 1.00e-85 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Mibi09g1746 PK_Tyr_Ser-Thr 2.6e-47 CL0016