Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1742 ATGGAGGCTAAATTTAGGGGGAAGAATCAGTATGTATGTGGGCCTGTGGTGCCGGAGACGAAATCAGTGGGGAAAAAGAGTTTGGAGTGGAATTTGGAAGACTGGAAATGGGATGGAGATCTTCTCACAGCTAGTCCACTGAATCCAGTTCCATCTGATTGTAGAAATAGGCAGTCTTTCCCAGTTGATTCTGAAATTCCTGTGAAAGCTAATACTCCTAACATTTTATCTTCTAATTGGGATGATGATGCCAACCCTGAGAAAGGAAAGAGAGAATTGGAGAAAAGGAGGAGAGCTGTTATATCTGAAGGTGATGAGATGAATGATGAAGCTGGTTGTCTTAATTTAAACCTTGGTGCTCAAATTTACCCTATCATGGAAGGGGATGAGAAAAGTGGTAAAAAGACAAAGATAGTTGGGAGTGGGACTACTTCAAACCGAGCGGTTTGTCAGGTGGAAGATTGTAGGGCTGATCTTAGTAATGCAAAAGATTACCACCGTCGGCATAAGGTTTGTGATATGCATTCCAAGGCCAGCAAAGCACTTGTAGGAAATGTTATGCAGCGTTTTTGTCAACAGTGTAGCAGGTTTCATGTTCTTCAAGAGTTTGATGAGGGGAAAAGAAGTTGTCGGAGGCGTTTGGCAGGCCACAATAGGAGGAGGAGGAAGACGCATCCTGATGCTGTCGTTAATGGAGGCTCCCTGAATGATGAAAGGGGCAGCAGCTATCTGTTAACAAGTCTTCTCCGTATACTGTCCAATATGCACTCAAGTGACTCGGATGCTACTAGGGACCAAGATATTCTCTCTCATCTGCTAAGGAATCTGGCAAGTCTGGCTGGTACAATCAATGGAAGGAACATAGCCTCCTTATTGGAGGGATCCCAAGGGTTGGTGAATGCTGGGACATCTGGAACTTCCCAAAAAGTGCCTAATCTAAATTCAAAGGGCCCTGAACCCATTAGATCTCCGGGTTCTTCCATCAAGACAGATAATGGTCTCAGCAGTCAGGACCCTCCAAAGCCTATGGGAAAGTCTGATACAGTGCCTGCTATGGCACAAAAATGTTTACCTTCAGGTGATGTTGGAGCTGGAAGTTTAAAATCTCCTTCAGGATCACAGCCTTCAAATATGCTTCTGTCAAGGGATAGCCTTCCACCCCAATCAGTCGCAGCAGAGACTGCAGTTAGAAGGAACGGTTTAAATCACATTGACCTCAATAATGTATATGATGATGTACAAAATGATGCTGAGAATCTTAGGATGTCTCATCCACCTGGAGCTTCAGGTATTGGATCTCTTGATCACCCTTCATGGTTACAACTTGACACTCAAAAGTCGAGTCCACCACAGACAAGCAGAAACTCGGATTCAACCTCCTCTCAGTCACCTTCTAGTTCTAGTGGAGAAGCTCAGAGCCGTACAGATCGAATTGTTTTCAAACTTTTTGGAAAGGATCCAAATGATTTTCCTCTTGTTCTTCGATCGCAGCTTCTCAGCTGGTTATCCCACAGTCCCACAGAGATTGAGAGCTATATAAGGCCAGGCTGTATCATATTAACAGTATATCTCCGTCTAGAAAAATCTGCATGGGATGAGCTGTGCTGTAATTTAGGACTCAGCTTGAAAAGGCTTCTTGCTGCATCAAATGATCCTTTTTGGACGACAGGGTGGGTATATGCAAGAGTGCAGCATTCTGTGGCCTTTTTGTACAATGGTCAGGTTGTTCTAGACGTTCCCTTGAGCCTTAGAAGCCCACAACACTGTAGGATTTTATGCATTAAACCACTTGCCGTTTCTTCAATGGCAAGCACTCAATTTGTTGTCAAAGGTGTCAACCTTTTCCATTCTAGCACAAGGTTACTTTGTGCACTTGAAGGGCAGTATCTGGCACAGTATAGTTGTTGTGACTTGATTGATGGTGTCGATACAGCTACTGAACATGATCAGCATCAGTGCCTTAGGTTCTCTTGTGCTATACCAAGTGTTACTGGAAGGGGATTTATTGAGGTGGAAGACCATGGTCTTAGCAGCTGTTCCTTTCCTTTTATTGTTGCGGAGCCAGCAATTTGTACAGAGATCTGTAATCTGGAGAGTGTGATTGAGTCAGCTGAGATCTGTAAAGATGTACAGATAAGAAGCAAACAAATGGAAGAAAAGACTCGAGCCTTGGATTTCGTACAAGAAATGGGTTGGCTCCTTCACAGAACTCGCATGAAAGCTAGGTTGGGTCCCATGGCACCTGTCCAGGATCTGTTCCAATTCAATCGGTTCAAGTGGCTTGTTTATTTCAGCATGGACCATGATTGGTGTGCTGTGACGAAAAAGCTTCTGGACATTATGTTTGAGGGTAGTATTGATGCCGGAGAGCATAACTCTGCCGAGCTTGCATTGTTAGACTTGGGTCTTCTACATAGAGCTGTGAGGAGGAGTTGCACGCCTATGGTGGAACTACTGTTGAAATTTGTGCCAGCTCAATCTTTAGACGATGACAGTAAGGAGAAACAAGCTGGCAAGCACTCTGACAGATTCTTATTTAAACCTGATAGTGCTGGCCCTGCCGGTTTGACTCCCCTTCATGTTGCGGCAAGCATGCATGGCTCAGAGAATGTATTGGATGCATTAACCGATGACCCTGGAATGGTGGGAATCAAGGCATGGAAAAGTGCCCGGGACAACACAGGTTTGACCCCAGAGGACTACGCATCCATGAGGGGCTACCACTCTTACATTCAGCTCATCCAGACAAAAACAAGCAAGAGAAGTGAAGAAACTCATTACCATGTGCTTGACATCCCATCTTCCATTGTAGATAGTAACTCAAAGAAGAAGCAAAGGTCATCATCGAAAGTTTCGAGCCTGCAAACCGAGAAGGTTGTGATGGCTGCAGCAATGACTCCAGGTCAATGTGGGCTATGTCAGCACAAGCTGACTTGTCACGGCACGAGGACGGCACTGGTTTATAGGCCAGCAATGCTCTCAATGGTGGCCATTGCCGCTGTATGTGTCTGTGTGGCTTTGCTCTTCAAAAGCTCACCCCAAGTCTCCTATGTCTTCCAGCCCTTCAGATGGGAATCATTAGATTATGGCTCAATGTAG 3099 0.4501 MEAKFRGKNQYVCGPVVPETKSVGKKSLEWNLEDWKWDGDLLTASPLNPVPSDCRNRQSFPVDSEIPVKANTPNILSSNWDDDANPEKGKRELEKRRRAVISEGDEMNDEAGCLNLNLGAQIYPIMEGDEKSGKKTKIVGSGTTSNRAVCQVEDCRADLSNAKDYHRRHKVCDMHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHPDAVVNGGSLNDERGSSYLLTSLLRILSNMHSSDSDATRDQDILSHLLRNLASLAGTINGRNIASLLEGSQGLVNAGTSGTSQKVPNLNSKGPEPIRSPGSSIKTDNGLSSQDPPKPMGKSDTVPAMAQKCLPSGDVGAGSLKSPSGSQPSNMLLSRDSLPPQSVAAETAVRRNGLNHIDLNNVYDDVQNDAENLRMSHPPGASGIGSLDHPSWLQLDTQKSSPPQTSRNSDSTSSQSPSSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRSQLLSWLSHSPTEIESYIRPGCIILTVYLRLEKSAWDELCCNLGLSLKRLLAASNDPFWTTGWVYARVQHSVAFLYNGQVVLDVPLSLRSPQHCRILCIKPLAVSSMASTQFVVKGVNLFHSSTRLLCALEGQYLAQYSCCDLIDGVDTATEHDQHQCLRFSCAIPSVTGRGFIEVEDHGLSSCSFPFIVAEPAICTEICNLESVIESAEICKDVQIRSKQMEEKTRALDFVQEMGWLLHRTRMKARLGPMAPVQDLFQFNRFKWLVYFSMDHDWCAVTKKLLDIMFEGSIDAGEHNSAELALLDLGLLHRAVRRSCTPMVELLLKFVPAQSLDDDSKEKQAGKHSDRFLFKPDSAGPAGLTPLHVAASMHGSENVLDALTDDPGMVGIKAWKSARDNTGLTPEDYASMRGYHSYIQLIQTKTSKRSEETHYHVLDIPSSIVDSNSKKKQRSSSKVSSLQTEKVVMAAAMTPGQCGLCQHKLTCHGTRTALVYRPAMLSMVAIAAVCVCVALLFKSSPQVSYVFQPFRWESLDYGSM 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1742 1032 Pfam SBP domain 150 223 IPR004333 GO:0003677
Mibi09g1742 1032 Gene3D - 140 211 IPR036893 GO:0003677|GO:0005634
Mibi09g1742 1032 Coils Coil 90 110 - -
Mibi09g1742 1032 MobiDBLite consensus disorder prediction 419 473 - -
Mibi09g1742 1032 MobiDBLite consensus disorder prediction 214 236 - -
Mibi09g1742 1032 MobiDBLite consensus disorder prediction 69 93 - -
Mibi09g1742 1032 MobiDBLite consensus disorder prediction 302 342 - -
Mibi09g1742 1032 MobiDBLite consensus disorder prediction 302 391 - -
Mibi09g1742 1032 ProSiteProfiles Zinc finger SBP-type profile. 147 224 IPR004333 GO:0003677
Mibi09g1742 1032 SUPERFAMILY Ankyrin repeat 803 914 IPR036770 -
Mibi09g1742 1032 Gene3D - 775 930 IPR036770 -
Mibi09g1742 1032 MobiDBLite consensus disorder prediction 438 473 - -
Mibi09g1742 1032 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 95 896 IPR044817 GO:0003677
Mibi09g1742 1032 FunFam Squamosa promoter-binding-like protein 14 141 211 - -
Mibi09g1742 1032 SUPERFAMILY SBT domain 148 229 IPR036893 GO:0003677|GO:0005634
Mibi09g1742 1032 MobiDBLite consensus disorder prediction 366 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1742 Mibi-ChrMibi09 35836284 35842358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1742 1 1031 SBP-box Gene Family AT3G60030 47.615 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi09g1742 SBP 7.9e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1742 09 35836284 35842358 Mibi09g1742 09 35836284 35842358 ECH