Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1725 ATGATTGTGAGCCAAAATATGGTTGCCAAAGAAATTGTGTGTCAGCAAGGCATTCCTGTGTTAGATGTGGAGTATCATCTTCGTGTCGCACAAGAACACAACGTTAAGGTGGAGGTTTCTCCAAGATCTTCTTCTGTTCCGATCTTTGGCCAAGTTCGGGTTTCTTCTGAATCAATTTCTACTGAAACGTGCCGCTTTGAAATGGCTGAGAGTTGTTCTGAGATAATTAATGATCCCATTAAAGAGATCTCTTCACCTAAATTTGTCCCAAATGTCCGATCTGGTTGCCATGCTGATATTGGACCACGGGGATCTATGGATGATGAACACGTTCAAATAGATGATCTTGCTTCCCATCTGGGACTTGTGTTCAAGTCTCCAATACCGTGTGCATTTTATGCAGTTTTTGACGGCCATGGAGGACCTGATGCAGCCTATTTTGTCAAGAGGAATGCTATGAGACTATTTTTTGAAGATTCTAATCTGCTGCTGTCACATGATTCTGATGCATTATTTCTAAAGAAATTGGAGGATTCCCATAGGAAAGCTTTTTTACTTGCAGATCACGCCTTAGCTAACGAAGCAACTGTTAGTACTTCCTGTGGGACAACAGCATTGACTGCACTTATACTTGGAAGTCATTTAATGGTTGCAAATGCGGGGGATTGTCGGGCAGTTCTTTGCAGAAGAGGAGTGGCTGTTGACTTGTCTCAAGATCACAGAGCAAGTTATTTACCAGAAAAGAGGAGAGTAGAAGAGTTAGGTGGCTTCGTTGATGATGGCTATCTAAATGGTTATCTGTCTGTGACCCGAGCCCTTGGGGACTGGGATTTAAAACTTCCACTCGGTTCTGCTTCACCCCTTATTGCTGATCCAGATGTTCTACAGGTTTCATTGACCGGGGATGATGAGTTTTTGATCATTGGGTGTGATGGGATTTGGGATGTGATGTCAAGTCAGGAAGCAGTTAGTCTTGTCCGCCGTGGTTTGAGAAGGCATGATGATCCACAGCAATGTGCTAGAGAGCTAGTCAAGGAAGCACTGCGCTTGAATACATCAGATAATCTCACTGTTATTGTTATATGCTTGTCTTCCATTGAAAGCATAGTTGAATCATTTCCACCCCAGAGGCGAAGATTTAGAGCTTGTTCTCTTTCTGAGGAGGCTCGTAACAGATTGAAGAGCTTACTTGAGGGCAATTGA 1203 0.4314 MIVSQNMVAKEIVCQQGIPVLDVEYHLRVAQEHNVKVEVSPRSSSVPIFGQVRVSSESISTETCRFEMAESCSEIINDPIKEISSPKFVPNVRSGCHADIGPRGSMDDEHVQIDDLASHLGLVFKSPIPCAFYAVFDGHGGPDAAYFVKRNAMRLFFEDSNLLLSHDSDALFLKKLEDSHRKAFLLADHALANEATVSTSCGTTALTALILGSHLMVANAGDCRAVLCRRGVAVDLSQDHRASYLPEKRRVEELGGFVDDGYLNGYLSVTRALGDWDLKLPLGSASPLIADPDVLQVSLTGDDEFLIIGCDGIWDVMSSQEAVSLVRRGLRRHDDPQQCARELVKEALRLNTSDNLTVIVICLSSIESIVESFPPQRRRFRACSLSEEARNRLKSLLEGN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1725 400 FunFam Probable protein phosphatase 2C 22 78 366 - -
Mibi09g1725 400 Pfam Protein phosphatase 2C 103 355 IPR001932 -
Mibi09g1725 400 ProSitePatterns PPM-type phosphatase domain signature. 132 140 IPR000222 GO:0043169
Mibi09g1725 400 SMART PP2C_SIG_2 108 363 IPR001932 -
Mibi09g1725 400 ProSiteProfiles PPM-type phosphatase domain profile. 93 363 IPR001932 -
Mibi09g1725 400 PANTHER PROTEIN PHOSPHATASE 2C 70 361 IPR015655 GO:0004722|GO:0006470
Mibi09g1725 400 SMART PP2C_4 83 361 IPR001932 -
Mibi09g1725 400 CDD PP2Cc 92 363 IPR001932 -
Mibi09g1725 400 Gene3D - 79 368 IPR036457 -
Mibi09g1725 400 SUPERFAMILY PP2C-like 84 364 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1725 Mibi-ChrMibi09 35618568 35620395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1725 1 399 PP2C-type Phosphatase Gene Family AT1G48040 56.265 1.96e-147 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Mibi09g1725 PP2C 3.1e-64 CL0238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1725 09 35618568 35620395 Mibi09g1725 09 35618568 35620395 ECH