Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1708 ATGGCTGCAAATAATGGTAGTGTGGATCTCTCTCCCTCTGAAGCCTCTAGCATCTCAGGAGGGTCCAAAGGAGAAGGATCCAGAGATAAAGTGATCGAAAACCAGAAGATGAAGATGGTTCAAATTACCAGCAGTGACGATGATTCTCTTCACAAATCGAAGTTTGAGTTGGATCTCTTCCAATCAGGAGGAGGGAACATCATAGGTTCTTCATCTTCATCAAAAACAAATATCATTAACAACAATGAAAAAGATCATGAATATGAAAATATTCTTGATGATGATCATGAGAAGAACAGTACTACGGAAAGGACTTTTTGTTGCAACTTTTGCAAAAGAGAGTTTTCATCCTCACAAGCCCTGGGAGGCCATCAAAACGCACACAAACAAGAGCGTGCAATAGCAAAACGACGACAAGCTGGGATTGTTTCTGATCATCATTTTGGTTTCCTAGGGAATCATTATTATTCTCCTCACTATTCTTATTATAATGGTAATTACCCTAATTACCATCCTAACCCTCTGGTTAACAGCCCTTTGATCAATTATAATAGGCCACTTGGGGTTAGAATGGACTCCATGATTCATAAGCCTTCTTATACTAACCCTAATTTTAGGTTTAGGCATAATAATGACAATCAAACTCTAGATAGGTTTGGAATTATGGCAAGTTCTGGAACTTTGAGGATTGAAGAAACTAGTGATACTAGTACTCCAACTCGTCCATATCATCAATTTGGGCTTAATAATTCTTCTTCTTCAACTGCTACTGCTACTACTGCTGATGGTGGTCAACATATCAAGTTCATACCAGAAGAAGCTCCCAAAAAAGACAACGAAAGCGATCTTGATCCTTCGGGTCTTGATTTGTCTCTTAAGCTTTAA 885 0.3853 MAANNGSVDLSPSEASSISGGSKGEGSRDKVIENQKMKMVQITSSDDDSLHKSKFELDLFQSGGGNIIGSSSSSKTNIINNNEKDHEYENILDDDHEKNSTTERTFCCNFCKREFSSSQALGGHQNAHKQERAIAKRRQAGIVSDHHFGFLGNHYYSPHYSYYNGNYPNYHPNPLVNSPLINYNRPLGVRMDSMIHKPSYTNPNFRFRHNNDNQTLDRFGIMASSGTLRIEETSDTSTPTRPYHQFGLNNSSSSTATATTADGGQHIKFIPEEAPKKDNESDLDPSGLDLSLKL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1708 294 MobiDBLite consensus disorder prediction 269 284 - -
Mibi09g1708 294 SUPERFAMILY beta-beta-alpha zinc fingers 101 133 IPR036236 -
Mibi09g1708 294 MobiDBLite consensus disorder prediction 1 33 - -
Mibi09g1708 294 ProSitePatterns Zinc finger C2H2 type domain signature. 107 128 IPR013087 -
Mibi09g1708 294 MobiDBLite consensus disorder prediction 1 23 - -
Mibi09g1708 294 MobiDBLite consensus disorder prediction 230 294 - -
Mibi09g1708 294 MobiDBLite consensus disorder prediction 230 262 - -
Mibi09g1708 294 Gene3D Classic Zinc Finger 80 148 - -
Mibi09g1708 294 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 10 294 IPR044246 GO:0009788
Mibi09g1708 294 Pfam C2H2-type zinc finger 106 130 - -
Mibi09g1708 294 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 133 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1708 Mibi-ChrMibi09 35450420 35451808 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1708 82 139 C2H2 Transcription Factor Family AT5G01860 53.448 1.40e-16 75.1