Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1678 ATGGGAACGCCACAACCAGAGGAGCTTCTAAAGAAGATCGAGAATCTCGAAGCAGGTCACGCTCATCTGAAGCAAGAAATGTCAAAGCTGAAGCTATCTGGTGCGAGCGATGCTCGAGCTGAACAAAGCCATCATCATCGACAGAGGTCGCACTCGATTTCGCCGCAACGTTCGAGATTAGGTGTGCCAAATAGGAGAGGCGGAGGCGGCGGATTTGATGGGCCAGCTTCGTGGAAGAAAGGTTCGATTTCGTTTAAACATTCATCGCCGCTTCAGAGGGAAAGCCGTAGTAGTGATCCTCAAAATGGTAATGATGGAGAAGAAGGTGGCGTTGGAAGAAGAGGAGGAGGCCCTTCAGCTGTCAATTTTACTGATAAGCAGTATCTCAATATTTTGCAGTCAATGGGACACTCTGTTCATATATTGGATCTTAACGGTCGTATAATTTACTGGAATCGTAGTGCTGAACATCTATATGGTTATTCATCGGAAGAAGCCCTTGGTAAGGATGGCATTGAGCTGCTTGTCGACCCCAGGGATTTTGTCTTAGTCAATGATATAATCAACCGGGTCAGTATGGGAGAGAAATGGTTTGGGCAGTTCCCTGCCAGAAATAAGATGGGAGAGAAGTTTTTGGCTGTTGCTACTAATACTCCTTTCTATGACGATGATGGAAGTTTGATTGGCATTATTTGTGTCTCTAGTGATTCACGACCCTTCCTTGAAGTGAGAGTTCCATTCTCAGGAGTAAAGCACTTCGAAACAGGTTCTGGCTCCAACAATCTTAGAAATAGCATTACAAATAAACTTGGTCTCGATTCTCAACAGCCTCTTCAAGTTGGTATAGCATCAAAAATTACTAATTTGGCGTCCAAGGTAAGTAACAAAATGAAGTCAAGAATCCGAACAGGAGACAATAATGTGGATCGTGAAGGCGGGAGTGGTGAAAGTCATCATTTTGAGCATAGCCTCTCAGATTTGGGTGTTTCAGACCATAGAGAAGATGCTAATTCAAGTGGAGCTAGCACACCCAGGGGAGATGTGCCCCCATCTCCCTTTGGTGTATTTTCTCGCACAGAAGACAGAAGTCAAGGGAAAAATTTTGGAGATTCTGGTGATGAGGGTGAAGGAAAACCTATTCATAAAGTCCTAACTTCCAAGGCTGAAGCATGGATTCAAAGGAAAACATTATCATGGCCATGGAAAGCAAATGAACGGGATGGGTTAGAGGGAAGGAACGTCCGTGCTGGTTGGCCTTGGTTGCAGAATGATCAAGAAAATGAGTTGGCTCAGCGGAAGCCTCTTTCTTCTTGTGTGAGGCCAGAAAGTCAGGCAGGAGAAGGTAATCGAACTGTTAATAATGAAGCATCAGGATCCTGGTCCTCCTTCAATGTTAACAGCACAAGTAGTGCAAGCAGCGGTGGGAGTGGCAGCAGTGCTGTCAATAATAAATTGGACATGGATACTGATTGTCTGGATTATGAAATCTTGTGGGAAGACCTGACAATTGGAGAACAAATTGGGCAAGGATCATGTGGAACTGTGTATCATGCTCTGTGGTATGGATCAGATGTTGCGGTCAAAGTATTCTCCAAGCAAGAATATACAGATGATGTGATAATGTCCTTCAGACAGGAGGTATCTGTTATGAAAAGACTTAGACATCCAAATGTCCTTCTGTTCATGGGGGCAGTAACTTCACCTGAACGTCTCTGCATTGTGACAGAGTTTCTCCCACGTGGAAGCTTGTTTCGCTTACTCCAGAGAAACACAGCCAAACTTGACTGGAGAAAGCGTGTTCATATGGCTTTAGATATTGCACGGGGTGTAAACTATCTTCATCATTGCAGCCCACCTATCATTCATCGAGATTTGAAGTCTTCAAATCTTCTAGTTGACAAGAACTTGAATGTGAAGGTTGGTGATTTTGGCCTTTCGCGCCTAAAGCATGAAACATTTCTTACAACAAAGACAGGAAAGGGAACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAGCCCTCTGATGAGAAGTCTGATGTATACAGCTTTGGAGTGATATTGTGGGAACTTACAACTGAGAAGATCCCTTGGGAAAGTCTCAACTCAATGCAGGTGATTGGAGCTGTTGGGTTCATGAATCAGCGGCTGGAAATTCCAAAGGATGTTGATCCCAAGTGGGCTGTTATAATTGAGAGCTGCTGGCATAGTGATCCAGCGCTCCGGCCAACATTTCAGGAACTTCTGGAAAAGCTTCGAGAGCTGCATAAACGTTATGCCCTTCAATTTCAAGCAGCTCGTTCTGCTGGTGCTGAAAACACTCAAAAGGAGTCCTAA 2340 0.4453 MGTPQPEELLKKIENLEAGHAHLKQEMSKLKLSGASDARAEQSHHHRQRSHSISPQRSRLGVPNRRGGGGGFDGPASWKKGSISFKHSSPLQRESRSSDPQNGNDGEEGGVGRRGGGPSAVNFTDKQYLNILQSMGHSVHILDLNGRIIYWNRSAEHLYGYSSEEALGKDGIELLVDPRDFVLVNDIINRVSMGEKWFGQFPARNKMGEKFLAVATNTPFYDDDGSLIGIICVSSDSRPFLEVRVPFSGVKHFETGSGSNNLRNSITNKLGLDSQQPLQVGIASKITNLASKVSNKMKSRIRTGDNNVDREGGSGESHHFEHSLSDLGVSDHREDANSSGASTPRGDVPPSPFGVFSRTEDRSQGKNFGDSGDEGEGKPIHKVLTSKAEAWIQRKTLSWPWKANERDGLEGRNVRAGWPWLQNDQENELAQRKPLSSCVRPESQAGEGNRTVNNEASGSWSSFNVNSTSSASSGGSGSSAVNNKLDMDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYTDDVIMSFRQEVSVMKRLRHPNVLLFMGAVTSPERLCIVTEFLPRGSLFRLLQRNTAKLDWRKRVHMALDIARGVNYLHHCSPPIIHRDLKSSNLLVDKNLNVKVGDFGLSRLKHETFLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELTTEKIPWESLNSMQVIGAVGFMNQRLEIPKDVDPKWAVIIESCWHSDPALRPTFQELLEKLRELHKRYALQFQAARSAGAENTQKES 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1678 779 CDD STKc_MAP3K-like 507 753 - -
Mibi09g1678 779 ProSiteProfiles Protein kinase domain profile. 501 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1678 779 MobiDBLite consensus disorder prediction 363 379 - -
Mibi09g1678 779 PRINTS Tyrosine kinase catalytic domain signature 614 632 IPR001245 GO:0004672|GO:0006468
Mibi09g1678 779 PRINTS Tyrosine kinase catalytic domain signature 575 588 IPR001245 GO:0004672|GO:0006468
Mibi09g1678 779 PRINTS Tyrosine kinase catalytic domain signature 724 746 IPR001245 GO:0004672|GO:0006468
Mibi09g1678 779 PRINTS Tyrosine kinase catalytic domain signature 661 671 IPR001245 GO:0004672|GO:0006468
Mibi09g1678 779 PRINTS Tyrosine kinase catalytic domain signature 680 702 IPR001245 GO:0004672|GO:0006468
Mibi09g1678 779 ProSiteProfiles PAS repeat profile. 124 195 IPR000014 -
Mibi09g1678 779 MobiDBLite consensus disorder prediction 442 459 - -
Mibi09g1678 779 SMART serkin_6 501 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1678 779 Gene3D PAS domain 137 239 - -
Mibi09g1678 779 MobiDBLite consensus disorder prediction 298 333 - -
Mibi09g1678 779 TIGRFAM sensory_box: PAS domain S-box protein 126 236 IPR000014 -
Mibi09g1678 779 Gene3D Phosphorylase Kinase; domain 1 494 578 - -
Mibi09g1678 779 FunFam PAS domain-containing protein tyrosine kinase family protein 579 770 - -
Mibi09g1678 779 Pfam PAS fold 127 234 IPR013767 GO:0006355
Mibi09g1678 779 SUPERFAMILY Protein kinase-like (PK-like) 489 752 IPR011009 -
Mibi09g1678 779 MobiDBLite consensus disorder prediction 297 379 - -
Mibi09g1678 779 Gene3D Transferase(Phosphotransferase) domain 1 580 765 - -
Mibi09g1678 779 MobiDBLite consensus disorder prediction 82 104 - -
Mibi09g1678 779 MobiDBLite consensus disorder prediction 425 459 - -
Mibi09g1678 779 Coils Coil 13 33 - -
Mibi09g1678 779 SUPERFAMILY PYP-like sensor domain (PAS domain) 130 233 IPR035965 -
Mibi09g1678 779 Pfam Protein tyrosine and serine/threonine kinase 501 753 IPR001245 GO:0004672|GO:0006468
Mibi09g1678 779 FunFam PAS domain-containing protein tyrosine kinase 494 578 - -
Mibi09g1678 779 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 264 759 - -
Mibi09g1678 779 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Mibi09g1678 779 MobiDBLite consensus disorder prediction 21 119 - -
Mibi09g1678 779 CDD PAS 139 236 IPR000014 -
Mibi09g1678 779 SMART pas_2 126 193 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1678 Mibi-ChrMibi09 35089430 35095660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1678 1 775 MAP Kinase Kinase Kinase AT3G06620 61.111 0.0 947
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mibi09g1678 PK_Tyr_Ser-Thr 6e-67 CL0016