Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1642 ATGGCAAATAACTTAACGGGGCAGCTCGTTAGTTCAGAGATACATGGATTCCATACATTGCAAGATCTGGATGTTAAAAACACTATGGAGGAAGCAAAAAGCAGATGGCTTCGCCCCAATGAGATTCATGCTATACTTAGTAATTACAAGTACTTCACCATCCATGTAAAGCCAATGCATTTGCCTCCAAGTGGTAGAATTGTATTATTTGACCGCAAAATGCTTAGGAACTTTCGAAAAGATGGATACAACTGGAAAAAGAAAAAGGATGGGAAAACTGTGAAGGAAGCTCATGAACACTTAAAAGTTGGTGATGAAGAAAGGATCCATGTATACTATGCACATGGCCAGGATAACCCAGGATTTGTGCGTAGATGTTATTGGCTTCTTGACAAGAGTTTGGAACACATAGTTCTTGTTCATTATCGTGAAACACAAGAGTTGCAGGGCTCTCCTGCTAGACCTGTAAATTCAAATTCTAGTTCGGTCTCTGATCCAATTGCGCCTTTGATTTTATCAGAAGAATTGGATTCTGGGACCAACAATCCATATGGTGGTGAAATTAATGACAATCTGAAACTCAAGAGTCATGAACTGAGGCTTCTTGAGCTCAACACACTTGAATGGGATGATTTAGTGGTGTCAAATGACTTCAACAATTCTACCACATCCATTGGAGCCAAGGCTCCATATTTTGATCAACAAAATCAGTCCTTGCTGAATGGAAATTTGAGCAATGTTACTGGCAGTCTGTCTGCTGAAATTCCTTCTTTTGATAACATGACACAACCTATTACTGGTAGCAGCAGTGCACCATATGGTTTCCCAGAAGCTATAAATCTTCAGACAACAGATAACCAAGCAAATCCAAATGCACAAAAGGGATATTCTGTTTCTGTGGGTGGTGTTGATTCCTTGGACACTTTGGTCAATAATACTTTGCAGAGTCAGGACAGCTTTGGAAGGTGGTTCAACAACATGATTTCTGATTCACAATGTTCAGTAGAAGAACCAGCTCTTGTATCGCCTGTTATATCTGTTCAAGAACCATATTCTTCTCTTGTAGGGGATCTTCAGCAACCATCTATGCCTGAACAGATTTTTAATATCACCGATGTCTCACCTTCATGGGCATCTTCCACTGAGAAGACCAAGATCCTGGTCACTGGAATTTTCCATGATGACTATCTACACTTTGCAAAGTCCAATCTATTTTGTGTCTGTGGTGATGCAAGTGTTCAAGCTGATATTGTCCAAGTTGGGGTCTATCGATGCTGGGTATCATCAAATTCTCTGGGACTCGTACACCTCTATATGAGCCTTGATGGACATAAGCCCATAAGCCAGGTTGTCAATTTTGAGTATCGTACTCCAGTTTTGCATGACCCTACAGCCTCTTTAGAAGAGAAGTACAACTGGGCTGAGTTTCGACTTCAAACAAGGCTTGCTTGTTTGCTCTTTGGTACTCATAAGAGTCTTGATATTATCACTAGTAAAGTATCATCTAATGCAATAAAGGAGGCTAAGAACTTTGCTTCAAAGACCTCATTGGTTTCCAAAAGTTGGCAATACTTGGTTAAATCAACTGAAGACAATAAAACCCCATTCCCTCAAGCAAAAGATGCACTGTTTGAAACCTCCTTGAAGAACGGATTAAAGGAATGGCTATTAGAAAGAATTCTCTTGGGCCGTAAGACGACTGAATATGATTCCCAAGGTCAAGGTGTGATCCATTTGTGCGCAATTATGGGATATACTTGGGCTGTTTCGTTATTTTCAGGATCAGGCTTGTCACTAGATTTTCGTGATAAATTTGGATGGACAGCTCTTCATTGGGCAGCATATTGTGGAAGGGAGAAAATGGTTGCATTGCTGCTGTCTGCTGGGGCAAAGCCTAATTTAGTCACAGATCCTACTCCACAAAATCCTGGTGGTTGTACTGCTGCTGATCTTGCTTATATGAAGGGTTATGAAGGCTTAGCAGCTTATCTTTCAGAAAAATCTCTGGTTGAGCAGTTCAATGACATGAGCTTAGCTGGAAATATTAGTGGCAAACTTGAAGCGAGCACAAATGATCCAGTAGAGTATGACAATCTCACTGAGGACCAACTATACCTAAAGGACACATTGGCAGCTTACCGAACAACTGCTGAGGCGGCAGCACGAATTCAGGCTGCATTTAGGGAGCACTCAATGAAAGTACAAGCAAAGGCGGTTCAGGTTTTTAATCCAGAGGATGAGGCCCGTATGATTGTTGCAGCAATGAAGATTCAACATGCCTATCGTAACTATAACACAAAGAGGACGATGGCAGCTGCAGCTCGCATTCAGCATAGGTTCCGTGCATGGAAATTACGCAAAGAATTTCTCAACATGCGACGTCAGGCTATCAAAATCCAAGCTGCTTTCCGGGGCTTTCAAATGAGGAAGCAGTACCGTAAAATTCTCTGGTCAGTTGGAGTACTTGAAAAAGCGATCCTGCGATGGCGGTTGAAGAGAAAAGGCTTCCGTGGGCTTCAGGTTAATCCTGTCCCACAAGAGCAAGAACCAAAGCAGGAAAGTGATGCAGAGGAGGACTTCTTCCGGACTGGTCGGAAACAAGCTGAAGAACGTGTGGAGAGGTCTGTAGTACGTGTTCAGGCCATGTTCCGTTCAAAGAAAGCACAAGAAGAGTATAGGAGGATGAAGCTGGCTCACAATCAGGCAAAGCTGGAGCTTGAGTATGAGGGGCTGCTCAATTCAGAGGTTGATGTTCTATAA 2760 0.4228 MANNLTGQLVSSEIHGFHTLQDLDVKNTMEEAKSRWLRPNEIHAILSNYKYFTIHVKPMHLPPSGRIVLFDRKMLRNFRKDGYNWKKKKDGKTVKEAHEHLKVGDEERIHVYYAHGQDNPGFVRRCYWLLDKSLEHIVLVHYRETQELQGSPARPVNSNSSSVSDPIAPLILSEELDSGTNNPYGGEINDNLKLKSHELRLLELNTLEWDDLVVSNDFNNSTTSIGAKAPYFDQQNQSLLNGNLSNVTGSLSAEIPSFDNMTQPITGSSSAPYGFPEAINLQTTDNQANPNAQKGYSVSVGGVDSLDTLVNNTLQSQDSFGRWFNNMISDSQCSVEEPALVSPVISVQEPYSSLVGDLQQPSMPEQIFNITDVSPSWASSTEKTKILVTGIFHDDYLHFAKSNLFCVCGDASVQADIVQVGVYRCWVSSNSLGLVHLYMSLDGHKPISQVVNFEYRTPVLHDPTASLEEKYNWAEFRLQTRLACLLFGTHKSLDIITSKVSSNAIKEAKNFASKTSLVSKSWQYLVKSTEDNKTPFPQAKDALFETSLKNGLKEWLLERILLGRKTTEYDSQGQGVIHLCAIMGYTWAVSLFSGSGLSLDFRDKFGWTALHWAAYCGREKMVALLLSAGAKPNLVTDPTPQNPGGCTAADLAYMKGYEGLAAYLSEKSLVEQFNDMSLAGNISGKLEASTNDPVEYDNLTEDQLYLKDTLAAYRTTAEAAARIQAAFREHSMKVQAKAVQVFNPEDEARMIVAAMKIQHAYRNYNTKRTMAAAARIQHRFRAWKLRKEFLNMRRQAIKIQAAFRGFQMRKQYRKILWSVGVLEKAILRWRLKRKGFRGLQVNPVPQEQEPKQESDAEEDFFRTGRKQAEERVERSVVRVQAMFRSKKAQEEYRRMKLAHNQAKLELEYEGLLNSEVDVL 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1642 919 SUPERFAMILY Ankyrin repeat 549 667 IPR036770 -
Mibi09g1642 919 Gene3D Immunoglobulins 363 459 IPR013783 -
Mibi09g1642 919 SMART iq_5 715 737 IPR000048 GO:0005515
Mibi09g1642 919 SMART iq_5 871 893 IPR000048 GO:0005515
Mibi09g1642 919 SMART iq_5 791 813 IPR000048 GO:0005515
Mibi09g1642 919 SMART iq_5 768 790 IPR000048 GO:0005515
Mibi09g1642 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 715 819 IPR027417 -
Mibi09g1642 919 Gene3D - 537 674 IPR036770 -
Mibi09g1642 919 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
Mibi09g1642 919 SMART ANK_2a 644 675 IPR002110 GO:0005515
Mibi09g1642 919 SMART ANK_2a 605 634 IPR002110 GO:0005515
Mibi09g1642 919 Pfam Ankyrin repeats (3 copies) 557 634 IPR002110 GO:0005515
Mibi09g1642 919 ProSiteProfiles IQ motif profile. 792 816 IPR000048 GO:0005515
Mibi09g1642 919 Pfam CG-1 domain 31 144 IPR005559 GO:0003677
Mibi09g1642 919 Coils Coil 885 905 - -
Mibi09g1642 919 ProSiteProfiles IQ motif profile. 769 798 IPR000048 GO:0005515
Mibi09g1642 919 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 24 901 - -
Mibi09g1642 919 SUPERFAMILY E set domains 369 456 IPR014756 -
Mibi09g1642 919 FunFam Calmodulin-binding transcription activator 2 768 816 - -
Mibi09g1642 919 SMART CG_1_2 29 146 IPR005559 GO:0003677
Mibi09g1642 919 Pfam IQ calmodulin-binding motif 794 813 IPR000048 GO:0005515
Mibi09g1642 919 FunFam calmodulin-binding transcription activator 5 535 675 - -
Mibi09g1642 919 ProSiteProfiles IQ motif profile. 873 901 IPR000048 GO:0005515
Mibi09g1642 919 ProSiteProfiles Ankyrin repeat profile. 605 637 IPR002110 GO:0005515
Mibi09g1642 919 Gene3D - 767 816 - -
Mibi09g1642 919 ProSiteProfiles Ankyrin repeat region circular profile. 605 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1642 Mibi-ChrMibi09 34767530 34777194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1642 29 905 CAMTA Transcription Factor Family AT3G16940 55.973 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mibi09g1642 CG-1 7e-46 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1642 09 34767530 34777194 Mibi09g1642 09 34767530 34777194 ECH