Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1634 ATGTCCTTACTTGTTGAAGATACAATAATAAGGCCCAAGAAAGCGTCAACCACGCCGTCCGGAAGAGCTCCTTGCTGTGAGAAAGTAGGTCTCAAGAAAGGACGATGGACTTCCGAGGAAGATAGAATCTTGACTCACTATATTCAACAACATGGTGAAGGTTCTTGGAGATCCTTGCCCAAAAATGCGGGGTTATTAAGGTGCGGGAAGAGTTGCAGACTAAGGTGGATAAACTATTTGAGAGAAGATGTGAAGAGAGGCAACATTACTCCTCAAGAAGAAGCCATGATCGTGAAGCTTCATGGTGCCATCGGTAATAGGTGGTCTATAATAGCAAGGCATCTACCAGGAAGAACAGATAATGAGATAAAGAATTATTGGAACTCTCATTTGAGAAGAAAAATTTACTGCTTCATGAAACCCTCAAACTCCAACGACACTCTTCCACCTATTGACATTGCTGCTCTGAACGCAGCTTCTTCTTCCAAAAGAGGAAGAGGTGGTCGAGGCAGAGCAACTCATCAAGCACCCACCATGCAAGAGGATAATGACAAGAACAATACTTTCACTTCAGATATGAATGCCCATGACATGTTTGACACCATGCACCAGAGAAAATCAAACCCACCAGATGAATCTCATGATGGAATTGATTCAATGATGGATTTGGATATTGGCTTTGATGCATATTGTTCTGAGATGAATGGTGATAATATAAATAATTGCAAAGCAGAATTTTGCCCCAACAATATGGATGGAGATCAAGGTGAGAACCTGGGGCCATTTCAGTGGCTAGATGATGAGATATTGAAACTTAATTACATGTTTGAAAGTGGGATGCTTGTGAATCCAACCAGTAGTGGAAATGACAGTATGGGAAGAGAATATGGCTATGGAGTGGTGGGTGTTAATGATAATGAGATGAATCTTCCAACAAGAGAGGACAGTAAAAGTGGTGTTTGGAGCTCAGTATCAAATTACAACAACAACAATAGTAGTAGTAGTTTGTCATCAAGGAATTCCGTTTATGATTATCAGTGGGGTGATTGGGATATTTCAGCTAGTGCCCAATCCCATGATCAATGGAACGTATTGCAGTGCTCTGAAGAAAGCCAGATGATGACTTGTTTGTGGGATGCCACTGCAAATGGTGAAGTAAATAATTTCCACTGA 1173 0.4118 MSLLVEDTIIRPKKASTTPSGRAPCCEKVGLKKGRWTSEEDRILTHYIQQHGEGSWRSLPKNAGLLRCGKSCRLRWINYLREDVKRGNITPQEEAMIVKLHGAIGNRWSIIARHLPGRTDNEIKNYWNSHLRRKIYCFMKPSNSNDTLPPIDIAALNAASSSKRGRGGRGRATHQAPTMQEDNDKNNTFTSDMNAHDMFDTMHQRKSNPPDESHDGIDSMMDLDIGFDAYCSEMNGDNINNCKAEFCPNNMDGDQGENLGPFQWLDDEILKLNYMFESGMLVNPTSSGNDSMGREYGYGVVGVNDNEMNLPTREDSKSGVWSSVSNYNNNNSSSSLSSRNSVYDYQWGDWDISASAQSHDQWNVLQCSEESQMMTCLWDATANGEVNNFH 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1634 390 CDD SANT 35 80 IPR001005 -
Mibi09g1634 390 FunFam Myb transcription factor 30 110 - -
Mibi09g1634 390 ProSiteProfiles Myb-like domain profile. 28 80 IPR001005 -
Mibi09g1634 390 Gene3D - 90 135 - -
Mibi09g1634 390 ProSiteProfiles Myb-like domain profile. 81 131 IPR001005 -
Mibi09g1634 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 135 IPR017930 -
Mibi09g1634 390 MobiDBLite consensus disorder prediction 176 193 - -
Mibi09g1634 390 SMART sant 32 82 IPR001005 -
Mibi09g1634 390 SMART sant 85 133 IPR001005 -
Mibi09g1634 390 Gene3D - 30 86 - -
Mibi09g1634 390 CDD SANT 90 131 IPR001005 -
Mibi09g1634 390 Pfam Myb-like DNA-binding domain 33 80 IPR001005 -
Mibi09g1634 390 Pfam Myb-like DNA-binding domain 86 131 IPR001005 -
Mibi09g1634 390 SUPERFAMILY Homeodomain-like 30 127 IPR009057 -
Mibi09g1634 390 MobiDBLite consensus disorder prediction 159 193 - -
Mibi09g1634 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 80 IPR017930 -
Mibi09g1634 390 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 21 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1634 Mibi-ChrMibi09 34627465 34631720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1634 21 364 MYB Transcription Factor Family AT5G49330 40.701 1.51e-74 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi09g1634 Myb_DNA-binding 8.3e-13 CL0123