Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1625 ATGAATCTGAGCAACCCCATAGCCAAGGGATCCATGTCAACGGCCACTTCCAGTTCTGCTCTCAAATCCGGCGGTGACGGCGACCAGTTCCCGGCGGGGTTGCGTGTTCTGGTGGTCGACGATGATCCCACTTGCCTTATGATCCTTGAGAAGATGCTTCGTACTTGCCTATATGAAGTAACAAAATGCAATAGAGCTGAAGTTGCATTGTCTCTTCTGAGAGAGAACAAGAACGGGTTCGACATAGTTATAAGCGATGTGCATATGCCAGACATGGATGGCTTTAAGCTTTTAGAGCACATAGGGTTGGAGATGGACCTTCCAGTTATTATGATGTCAGCAGATGATGGGAAAAATGTTGTTATGAAAGGTGTAACACATGGTGCTTGTGATTACCTAATAAAACCTGTGCGTATTGAGGCTTTGAGGAACATATGGCAGCATGTGGTTCGGAAAAGAAAGAATGAGTGGAAGGATTTGGAGCAATCGTATAGCGCTGAAGAAGGAGAGCGGCAACAAAAGGCCTCGGATGAAGCTGATTACTCATCTTCGGCGAACGAAGGAACTTGGAGAAATGGTAAGAAGAAGAGAGATGAGGAGGAAGATGCTGAGGACAAGGATGATTCTTCCACGTTAAAGAAGCCGCGCGTTGTTTGGTCTGTTGAGCTCCACCAACAGTTTGTGGCTGCTGTGAATCAACTCGGAATCGACAAGGCTGTTCCCAAAAAGATTCTGGAATTGATGAATGTTCCTGGGCTCACCAGAGAAAATGTTGCTAGCCATCTCCAGAAATACCGTCTGTATCTAAGAAGACTCAGTGGCGTTTCTCATAACCAGAGTAACATGAACAACTCTTTCATGAGTCCACAAGACGGAACCTTTGGGACAATGTCAGCATTTAATGGAATTGATCTTCAAGCTCTTGCGGTTGCAGGCCAGCTTCCGGCACAAAGTCTGGCGGCACTTCAAGCAGCCGGACTTGGTAGATCAACTGGTAAAGTTGGAGTATCTGTGCCCCTTGTTGATGAAAGGAATCTTTTCAGTTTTGAAAACCCCAGATTAAGATATGTAGATGGGCAACATCAGCACTTGAGAAATACTAAATCAACAAACTTGCTTCATGGAATCCCTACCAACATGGAGCCAAGACAGCTCGCCAATTTGCACCAATCAACGCAATCCCTCAGTGGCATGAATGCGCGAGTCAACGTATCTTCTGCACAGAGCAACTCTTTATTGATGCCAATGGCTCAATCTCAACCAAGAGGTCAGATGCTCAATGAAAGTACTGCTTCGCATGTTCAGAGACTTCCATTACAGGTTGGGCAGCCTGCTGTACAAAATGGGATCTCTAATGCTGCAATGGGAAGAAATGGGATTGCTGGTAATTACAGAGGAGCTGCTGCTTATAATCCAATTCCACAAACTTCTTCAATGCCAAGTTTTCCCTCAAACCAAACTACAGAAATGTCTGCCAGTAGTTTCCCACTCGGAAGCACACCAGGCATATCTAGTGTCACACCAAAAGGCGCATTTCAAGAGGAAGATACTTCAGGAATTAAAGGATCTGGGGGATTTATGCCGAGTTATGAGATTTTCGATGAACTGCACCAGCAAAAGTCCCATGCTTGGGGACAAAATGTGGGCCTCACATCATATGATACCTCCCAGCGTGTAAATCATTTGCCCAGTAACATTGATGTCTTGCCATCAGTCATAGTACATCACAGCTTTTCTTCCCCCACCCAACAACAGACTGGACAGCATAGAGATTCTTCTCTGATTGGTAAAGCCATGTACTCCCAAGGGAAAGGTTTGGAACAAGGAAATCTCCAAAATATTGATCACAACCTCCATCCACTTGTTGAAAATCCTGCAAGGGTTAAGACTGAAATAATATCTGATGCAAACTCTCATTCTAACTTCTTCCCCGAGCTTTACGGGCAGGATGATCTCATGAATGCACTTCTGAAACAGCAAGAAGGCATTGGAGCAGCTGAGAATGAATTTGACTTTGATGGATATTCATTGGACAACATTCCCGTCTAG 2049 0.4495 MNLSNPIAKGSMSTATSSSALKSGGDGDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEVALSLLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALRNIWQHVVRKRKNEWKDLEQSYSAEEGERQQKASDEADYSSSANEGTWRNGKKKRDEEEDAEDKDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSHNQSNMNNSFMSPQDGTFGTMSAFNGIDLQALAVAGQLPAQSLAALQAAGLGRSTGKVGVSVPLVDERNLFSFENPRLRYVDGQHQHLRNTKSTNLLHGIPTNMEPRQLANLHQSTQSLSGMNARVNVSSAQSNSLLMPMAQSQPRGQMLNESTASHVQRLPLQVGQPAVQNGISNAAMGRNGIAGNYRGAAAYNPIPQTSSMPSFPSNQTTEMSASSFPLGSTPGISSVTPKGAFQEEDTSGIKGSGGFMPSYEIFDELHQQKSHAWGQNVGLTSYDTSQRVNHLPSNIDVLPSVIVHHSFSSPTQQQTGQHRDSSLIGKAMYSQGKGLEQGNLQNIDHNLHPLVENPARVKTEIISDANSHSNFFPELYGQDDLMNALLKQQEGIGAAENEFDFDGYSLDNIPV 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1625 682 SUPERFAMILY Homeodomain-like 211 271 IPR009057 -
Mibi09g1625 682 SUPERFAMILY CheY-like 33 158 IPR011006 -
Mibi09g1625 682 SMART REC_2 34 146 IPR001789 GO:0000160
Mibi09g1625 682 MobiDBLite consensus disorder prediction 163 211 - -
Mibi09g1625 682 FunFam Two-component response regulator 210 273 - -
Mibi09g1625 682 PIRSF RR_ARR_type-B 11 662 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mibi09g1625 682 Gene3D - 211 273 - -
Mibi09g1625 682 Pfam Response regulator receiver domain 36 144 IPR001789 GO:0000160
Mibi09g1625 682 Gene3D - 34 173 - -
Mibi09g1625 682 MobiDBLite consensus disorder prediction 163 177 - -
Mibi09g1625 682 MobiDBLite consensus disorder prediction 1 24 - -
Mibi09g1625 682 FunFam Two-component response regulator 34 171 - -
Mibi09g1625 682 CDD REC_typeB_ARR-like 36 150 - -
Mibi09g1625 682 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 213 270 IPR017930 -
Mibi09g1625 682 PANTHER TWO-COMPONENT RESPONSE REGULATOR 34 389 IPR045279 GO:0009736
Mibi09g1625 682 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 214 267 IPR006447 GO:0003677
Mibi09g1625 682 MobiDBLite consensus disorder prediction 190 211 - -
Mibi09g1625 682 Pfam Myb-like DNA-binding domain 216 266 IPR001005 -
Mibi09g1625 682 ProSiteProfiles Response regulatory domain profile. 35 150 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1625 Mibi-ChrMibi09 34558460 34561432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1625 68 682 Response Regulator Gene Family AT3G16857 49.392 2.85e-173 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mibi09g1625 Response_reg 7.4e-23 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1625 09 34558460 34561432 Mibi09g1625 09 34558460 34561432 ECH