Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1602 ATGTGTGGAGGTGCTATCATTTCGGACTTCATTGCCGTGAAGAGAGGCCGGAAAGTGACCGGCGGCGACCTCTGGTCTGAGCTGGACCCATACTCCGACCTCCTTGGCTTCGATTCCTCCGCCAAAATCCAACCGCCTCAGACGCCCCCTCAGGTCCCCATCAATAAAGGAGGAGGGGGAAGTGAGAAGAAGGAGAAGAAAAGCGTGAAGAAGGGCAATGGTGGGAGAGTACGGAAGAATGTGTACAGAGGGATAAGGCAGAGGCCATGGGGGAAGTGGGCTGCAGAAATAAGGGACCCACACAAGGGAGTCAGAGTCTGGCTAGGCACCTACAACACCGCCGAGGAAGCCGCCAGGGCCTACGACCAAGCCGCCAAGCGCATCCGTGGCGACAAGGCCAAGCTCAACTTTCCGGCGGAGAGGCCGCCCGCCAAGAAGCGGTGTCTCAGCCCGGAGGTGAGTGAGGGCAGCAGTTGTAGCTACCAGAGTGGGCCGCCGGCGACGCCGTCTGCGGCGGATCTGGAGCTGAAGCAGCATATATCTGATCTGGAGTCTCTCCTGGGGCTGGAGCCGGAGGAGGAGATGCCGGCGGCGAGCGGCGGTGGTGATTGGGCGGAGACGGTGGACATGTGGATGCTGGATGACGTCATGATGAATCAACTGCCAAACAGTAGTGAGCTGTTGTACTAG 690 0.5957 MCGGAIISDFIAVKRGRKVTGGDLWSELDPYSDLLGFDSSAKIQPPQTPPQVPINKGGGGSEKKEKKSVKKGNGGRVRKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTYNTAEEAARAYDQAAKRIRGDKAKLNFPAERPPAKKRCLSPEVSEGSSCSYQSGPPATPSAADLELKQHISDLESLLGLEPEEEMPAASGGGDWAETVDMWMLDDVMMNQLPNSSELLY 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1602 229 MobiDBLite consensus disorder prediction 153 167 - -
Mibi09g1602 229 Pfam AP2 domain 81 130 IPR001471 GO:0003700|GO:0006355
Mibi09g1602 229 SUPERFAMILY DNA-binding domain 81 139 IPR016177 GO:0003677
Mibi09g1602 229 CDD AP2 82 139 IPR001471 GO:0003700|GO:0006355
Mibi09g1602 229 MobiDBLite consensus disorder prediction 38 77 - -
Mibi09g1602 229 Gene3D AP2/ERF domain 81 139 IPR036955 GO:0003700|GO:0006355
Mibi09g1602 229 SMART rav1_2 81 144 IPR001471 GO:0003700|GO:0006355
Mibi09g1602 229 FunFam Ethylene-responsive transcription factor 2 80 140 - -
Mibi09g1602 229 MobiDBLite consensus disorder prediction 137 171 - -
Mibi09g1602 229 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Mibi09g1602 229 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700|GO:0006355
Mibi09g1602 229 ProSiteProfiles AP2/ERF domain profile. 81 138 IPR001471 GO:0003700|GO:0006355
Mibi09g1602 229 PANTHER DNA-BINDING DOMAIN 64 161 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1602 Mibi-ChrMibi09 34288043 34289491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1602 1 217 AP2-EREBP Transcription Factor Family AT3G16770 45.914 1.56e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi09g1602 AP2 2.2e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1602 09 34288043 34289491 Mibi09g1602 09 34288043 34289491 ECH