Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1601 ATGAATTCGAACTATGGCAAATCCAACCAACAGAAAGGTTCTTCAACCTCTCTGAACAACTTCAATTTCGACTTTGATCTTGGGATCGGATCGAATCGACCCAAATCTCTCAACGATCAGAAAATCCCAACCTCCTCCAATTCATATTTCACTTCTTCATCCTCCACATCTTCGTCTTCTCAACCAAGACCTTCTTGGCAACCAGGGAAACCATCATGGACCCACCAGCCATCGCCAAGTCTGGCGGCTCAGCCTGGCTTGCCGGGTGGTCCCGTTTCAATGGTTGGGGATATCTTCGGCAAAAGCTGGGGATCTACTCAACCTTCGGCTCCTATTTCAACTGTTAGTAAAGATCCCAATCTCTTTGGGGATTTGGTGGGTTCTGCTTTAGGTCAAAGTTCTAAGACTAGTACCAATGTTCCCCTGAAAAATGCTACACCTATTTCAAAGCCATCCAGTACTGCATCCAACAAGGGTTCTTTTTCCATGGGGAATATGGCTGATTCATTGCCTAAAACTGGTAGTACAGTTCAAAACAATGGAAGTTGGGGACCTTCTGGTAATAGTGCTATGAGCTCCAATAAAAGCACCAATCTTGGGGGTCCTTCAATGCGGAGTATGAATGTTGGGGGTGGTGTAGCTGGTGGTAGTGGAATGAGTTCTAATAAAGATCCATTTGGTTCTTTGTCTGGTTTTGGATCCAAACAGTCTGGTAGTCTTAATTCAGCTAGCAAAACAAAAGGGAATGATGGAGGGGATGATGGTTTTGGAAGTTTTCAGGGTGCTTCCAAAAAGAGTTCTACTACATTTCCATCAAGCGGTTCAACAGAAAATAATATCAATCTTAATGGGTCTGTGCCTTTGAGCCAGAAACCTGTGCAAACTTCTGGTAGTGATCCATTGGACATGTTGTTCTCGAGTTCCTCGGCTACATCTGGAGGTGCTGCCGTGGCCTCTGAAGGATTTGGAGGACAGGCTTCTTCAGAAGTTGATGATTGGGGAATGGATTCTGGATTTGGTGGGGGAGACCATGATGTGGGTGGAACAACCACTGAGCTTGAAGGACTTCCTCCTCCTCCTGTTGGCATATCTGGTTCTGCAGCAAAAAGCAAGGGGTTGGACAATTACAAGCAGGGACAATTTGCTGATGCTATAAAGTGGCTTTCATGGGCTACCATCCTTCTTGAGAAATCAGGTGATAATGCAGGCACTACGGAAGTTTTGTCATGCAGGGCTTCATGTTTCAAAGAAGTTGGGGAGTACAAGAAAGCAGTTGCAGATTGTACAAAGGTGCTTGAGAACGATGAAACAAATGTATCTGTTCTTGTGCAACGTGCTCTCCTGTATGAGAGTATGGAAAAGTACAGACTTGGTGCTGAAGACCTGAGAACTGTTCTGAAGATTGATCCGAGCAATAGGGTTGCAAGAAGTACCATTCATCGATTGAATAAGATGGCTGATTAA 1464 0.4481 MNSNYGKSNQQKGSSTSLNNFNFDFDLGIGSNRPKSLNDQKIPTSSNSYFTSSSSTSSSSQPRPSWQPGKPSWTHQPSPSLAAQPGLPGGPVSMVGDIFGKSWGSTQPSAPISTVSKDPNLFGDLVGSALGQSSKTSTNVPLKNATPISKPSSTASNKGSFSMGNMADSLPKTGSTVQNNGSWGPSGNSAMSSNKSTNLGGPSMRSMNVGGGVAGGSGMSSNKDPFGSLSGFGSKQSGSLNSASKTKGNDGGDDGFGSFQGASKKSSTTFPSSGSTENNINLNGSVPLSQKPVQTSGSDPLDMLFSSSSATSGGAAVASEGFGGQASSEVDDWGMDSGFGGGDHDVGGTTTELEGLPPPPVGISGSAAKSKGLDNYKQGQFADAIKWLSWATILLEKSGDNAGTTEVLSCRASCFKEVGEYKKAVADCTKVLENDETNVSVLVQRALLYESMEKYRLGAEDLRTVLKIDPSNRVARSTIHRLNKMAD 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1601 487 MobiDBLite consensus disorder prediction 260 315 - -
Mibi09g1601 487 PANTHER OS03G0340700 PROTEIN 1 487 - -
Mibi09g1601 487 MobiDBLite consensus disorder prediction 33 81 - -
Mibi09g1601 487 Gene3D Tetratricopeptide repeat domain 365 486 IPR011990 GO:0005515
Mibi09g1601 487 MobiDBLite consensus disorder prediction 132 204 - -
Mibi09g1601 487 MobiDBLite consensus disorder prediction 221 248 - -
Mibi09g1601 487 ProSiteProfiles TPR repeat profile. 439 472 IPR019734 GO:0005515
Mibi09g1601 487 MobiDBLite consensus disorder prediction 1 100 - -
Mibi09g1601 487 MobiDBLite consensus disorder prediction 132 360 - -
Mibi09g1601 487 SUPERFAMILY TPR-like 367 480 IPR011990 GO:0005515
Mibi09g1601 487 SMART tpr_5 405 438 IPR019734 GO:0005515
Mibi09g1601 487 SMART tpr_5 365 398 IPR019734 GO:0005515
Mibi09g1601 487 SMART tpr_5 439 472 IPR019734 GO:0005515
Mibi09g1601 487 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1601 Mibi-ChrMibi09 34272427 34274377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1601 380 484 Calmodulin-binding Proteins AT3G25230 32.407 2.19e-10 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1601 09 34272427 34274377 Mibi09g1601 09 34272427 34274377 ECH