Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1551 ATGGAGGATAATAACAACAACCTGGGAGCTATTGGAAGTTCCTCATCATCAATCGATGGAGGAGGGATAATGATAAAGGAGCAAGACAGGTTGTTGCCAATTGCTAATGTTGGTCGGATTATGAAGCAAATCTTGCCGCAAAACGCGAAGATCTCGAAGGAAGCAAAGGAGACGATGCAGGAATGTGTATCGGAGTTCATAAGCTTCGTAACCGGCGAGGCTTCCGATAAGTGCAAGAAGGAGAGAAGGAAGACGGTTAATGGTGATGACATATGTTGGGCCTTGAAAACCCTAGGCTTTGATGATTACTCAGAGCCACTTCAAAGGTACTTGCATAGATATAGAGAGCTCGAAGTTGATCAACGAGTTAATAGTAATTATAATAATAATAACCATCATCAAGATACAGATCATTAA 417 0.4149 MEDNNNNLGAIGSSSSSIDGGGIMIKEQDRLLPIANVGRIMKQILPQNAKISKEAKETMQECVSEFISFVTGEASDKCKKERRKTVNGDDICWALKTLGFDDYSEPLQRYLHRYRELEVDQRVNSNYNNNNHHQDTDH 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1551 138 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Mibi09g1551 138 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 21 130 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mibi09g1551 138 FunFam Nuclear transcription factor Y subunit B-3 21 138 - -
Mibi09g1551 138 SUPERFAMILY Histone-fold 28 129 IPR009072 GO:0046982
Mibi09g1551 138 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Mibi09g1551 138 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Mibi09g1551 138 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Mibi09g1551 138 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mibi09g1551 138 Gene3D Histone, subunit A 24 138 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1551 Mibi-ChrMibi09 33624415 33624831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1551 23 118 CCAAT-HAP3 Transcription Factor Family AT2G47810 83.333 8.52e-59 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mibi09g1551 CBFD_NFYB_HMF 1.1e-27 CL0012