Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi09g1533 | ATGGAGCGGTACGGACGGGCTAGCGATGAGTCACACTCCGATCCGTCACCGGAATGGACTGAAACCGGAGGTGAAACTGGGCTTGAAGAATCTATTCGCCAATTGGGATTGGTCGGTGGGGAATCGTACCCTCAAAGACCTGAGGAGGCTGATTGTAACTATTATTTGAAGACAGGGTTTTGTGGGTATGGTTCTAGGTGTCGGTTCAATCATCCTCGTGACCGTGGTGTGGTTATAGGAGCTTCGAGGACTGGTGCGGATTATCCTGAGCGAGCAGGCCAGCCTGTATGTCAGTATTTTATGAGGACTGGATCTTGCAAATTTGGTGCTTCATGTAAGTACCACCATCCTAGGCTGGGAGGAGGCGTTGCTCCTGTGCCACTTAACTATTATGGATATCCATTGCGACCGGATGAGAAAGAGTGTTCGTATTATGTGAAAACAGGACAATGCAAGTTTGGTGCGACTTGTAAGTTTCATCACCCACATCCTGCTGGTGTTCAAGTTCCTGCCCCATTACCGGTTCCCCAAGCTTCTACTCTGCCTGTTCGAGTACCTTCACCATTCTATCCAACTATGCAGCCTCCATCTGGTCCTTCATCACAACAATATGGTGTAATGTTTGCAAGGCCATCTCTAGTACCAGGGTCATTAGTCCAAAATCCTTATGGGCCTGTGGTTATGTCCCCTGTACCTTTTTCAAGTTGGAATCCTTATCAGTCTCCTACAAGCCCTGCAGTTACTTCTAGTACTCCATCTAATGCTGGCTCAACGCACCTTTATGGGAATACCCAGCTACTTTCACCGGCACCTGCCTATACTGCACCTTATCAACCTACAGGTACCTCATTTGGTCCTTCAAGCACCAATCTGAGAGAACATTCTTATCCAGAAAGACCTGGTCAACCAGAATGTCAGCATTACATGAGAACAGGGGAGTGTAGATTTGGTCTTTCGTGTAGATACCATCATCCACCTGAATTGACTGCACCAAATGTGAATGTGGGCCTTAATCCTGTGGGTCTTCCTATGCGCCCGGGTGCACCACCTTGCATTCATTATGCACAGCGGGGAGTATGTAAGTTTGGTCCTGCATGCAAGTTTGATCACTCTGTGGGAGCATTGACTTACAGTCCATCTGCCTCTTCCTTTGTTAATGTGCCAGTTGTATCCATTCCTGCTGGTTTATCCGTCAGTACTCTTGCTCCATCGTCTTCATCGTCAGAGTTGCGGCCTGAACTCAGCCCTGGTTCAAGCGAGGAGCATGGATCATTCAAAATGTCTTTGTCAATGAGCACATCCACTGAATCAGTTGGCTTGGCTTTGTCATCTAGTGGAACCGTTTCTCAGTCAATTACTCAAACATCCACCCAAAGTTCTGTTCCAGTAGCGACTCCCACAATTACGACAAGCAGCCCTGTCTCTCATACCCCAAGCCAAGCAATGTGA | 1449 | 0.479 | MERYGRASDESHSDPSPEWTETGGETGLEESIRQLGLVGGESYPQRPEEADCNYYLKTGFCGYGSRCRFNHPRDRGVVIGASRTGADYPERAGQPVCQYFMRTGSCKFGASCKYHHPRLGGGVAPVPLNYYGYPLRPDEKECSYYVKTGQCKFGATCKFHHPHPAGVQVPAPLPVPQASTLPVRVPSPFYPTMQPPSGPSSQQYGVMFARPSLVPGSLVQNPYGPVVMSPVPFSSWNPYQSPTSPAVTSSTPSNAGSTHLYGNTQLLSPAPAYTAPYQPTGTSFGPSSTNLREHSYPERPGQPECQHYMRTGECRFGLSCRYHHPPELTAPNVNVGLNPVGLPMRPGAPPCIHYAQRGVCKFGPACKFDHSVGALTYSPSASSFVNVPVVSIPAGLSVSTLAPSSSSSELRPELSPGSSEEHGSFKMSLSMSTSTESVGLALSSSGTVSQSITQTSTQSSVPVATPTITTSSPVSHTPSQAM | 482 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi09g1533 | 482 | PANTHER | PROTEIN PHOSPHATASE RELATED | 36 | 403 | - | - | |
| Mibi09g1533 | 482 | SUPERFAMILY | CCCH zinc finger | 137 | 163 | IPR036855 | GO:0046872 | |
| Mibi09g1533 | 482 | MobiDBLite | consensus disorder prediction | 400 | 430 | - | - | |
| Mibi09g1533 | 482 | ProSiteProfiles | Zinc finger C3H1-type profile. | 136 | 164 | IPR000571 | GO:0046872 | |
| Mibi09g1533 | 482 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
| Mibi09g1533 | 482 | ProSiteProfiles | Zinc finger C3H1-type profile. | 91 | 119 | IPR000571 | GO:0046872 | |
| Mibi09g1533 | 482 | SUPERFAMILY | CCCH zinc finger | 348 | 375 | IPR036855 | GO:0046872 | |
| Mibi09g1533 | 482 | ProSiteProfiles | Zinc finger C3H1-type profile. | 299 | 327 | IPR000571 | GO:0046872 | |
| Mibi09g1533 | 482 | MobiDBLite | consensus disorder prediction | 453 | 482 | - | - | |
| Mibi09g1533 | 482 | Gene3D | - | 289 | 374 | - | - | |
| Mibi09g1533 | 482 | SUPERFAMILY | CCCH zinc finger | 303 | 326 | IPR036855 | GO:0046872 | |
| Mibi09g1533 | 482 | SUPERFAMILY | CCCH zinc finger | 94 | 117 | IPR036855 | GO:0046872 | |
| Mibi09g1533 | 482 | SMART | c3hfinal6 | 91 | 118 | IPR000571 | GO:0046872 | |
| Mibi09g1533 | 482 | SMART | c3hfinal6 | 138 | 163 | IPR000571 | GO:0046872 | |
| Mibi09g1533 | 482 | SMART | c3hfinal6 | 345 | 372 | IPR000571 | GO:0046872 | |
| Mibi09g1533 | 482 | SMART | c3hfinal6 | 46 | 73 | IPR000571 | GO:0046872 | |
| Mibi09g1533 | 482 | SMART | c3hfinal6 | 299 | 326 | IPR000571 | GO:0046872 | |
| Mibi09g1533 | 482 | Gene3D | - | 42 | 119 | - | - | |
| Mibi09g1533 | 482 | MobiDBLite | consensus disorder prediction | 239 | 295 | - | - | |
| Mibi09g1533 | 482 | MobiDBLite | consensus disorder prediction | 400 | 414 | - | - | |
| Mibi09g1533 | 482 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
| Mibi09g1533 | 482 | SUPERFAMILY | CCCH zinc finger | 47 | 74 | IPR036855 | GO:0046872 | |
| Mibi09g1533 | 482 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 348 | 371 | IPR000571 | GO:0046872 | |
| Mibi09g1533 | 482 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 94 | 118 | IPR000571 | GO:0046872 | |
| Mibi09g1533 | 482 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 301 | 326 | IPR000571 | GO:0046872 | |
| Mibi09g1533 | 482 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 138 | 162 | IPR000571 | GO:0046872 | |
| Mibi09g1533 | 482 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 49 | 73 | IPR000571 | GO:0046872 | |
| Mibi09g1533 | 482 | ProSiteProfiles | Zinc finger C3H1-type profile. | 46 | 74 | IPR000571 | GO:0046872 | |
| Mibi09g1533 | 482 | MobiDBLite | consensus disorder prediction | 239 | 303 | - | - | |
| Mibi09g1533 | 482 | Gene3D | - | 125 | 171 | - | - | |
| Mibi09g1533 | 482 | ProSiteProfiles | Zinc finger C3H1-type profile. | 345 | 373 | IPR000571 | GO:0046872 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi09g1533 | Mibi-ChrMibi09 | 33162842 | 33167155 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi09g1533 | 1 | 420 | C2H2 Transcription Factor Family | AT5G18550 | 55.378 | 3.98e-146 | 424 |
Transcription factors information