Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1532 ATGCCAAGCTCTAGAGCCTCATCAGAGAAGAAAACCCAGATGGGTTTGTGCCTTCTTCAAGCCAACCCATCATCTTTTAGTGGTGATCATAGGAGAGGGAGAAGAAAGCAGGGAGAAGCAGGAAGGTTTCTGGGAGTAAGGAGAAGACCTTGGGGAAGATATGCTGCAGAAATTAGAGACCCCACCACTAAAGAAAGACACTGGCTTGGCACTTTTGATACAGCCCAAGAAGCTGCTTTGGCTTATGATAGAGCTGCTTTGTCCATCAAAGGAAGCCAAGCAAGAACCAACTTCCTCTACACTGACATTAACACAACCTTTGGTAATAATAGTACTCTTCTTTGTCCCTTTGATGATGTTCATCAGCTTCATCAATCACTCTTTAGCAACAATACTCAGATGGAACAGCCAACCAATCAAAATAGCTCACCTCAGCTTCCTGAGACTTCCCAGGTTGAGATTACTGCTGCTGCATGTGACCATTCTTCTTCTTCAGTTCAGGAGGGTGGTGATAACTTATTCTTTATCTCCAATGATGATTCTAAATCAGGTTACTTAGAATGCATAGTTCCTGAAGTATGTTTCAGGCCTCCATCATCATCTTCTTCTAATGATAGCAACAACCAAAAGACATCTCAAGAAGCTGTGAAGAACATCATAGCCTCATCTAGCTCTGGAGATTTCACTTATCCAAATTATGAACTTGTTGGTCAAGAAACAATCTGGGATTGGAGCTGCAGTGAACTTGCTGCTATATTTGACAGTCCATTAAAGGTTGAAGATACTACTTCATCAACCACTACTTACGCTCCATCACTTCCTTCATTTGATGTTGATTTTGCAAACACACTCTTCTGA 858 0.4184 MPSSRASSEKKTQMGLCLLQANPSSFSGDHRRGRRKQGEAGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSIKGSQARTNFLYTDINTTFGNNSTLLCPFDDVHQLHQSLFSNNTQMEQPTNQNSSPQLPETSQVEITAAACDHSSSSVQEGGDNLFFISNDDSKSGYLECIVPEVCFRPPSSSSSNDSNNQKTSQEAVKNIIASSSSGDFTYPNYELVGQETIWDWSCSELAAIFDSPLKVEDTTSSTTTYAPSLPSFDVDFANTLF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1532 285 CDD AP2 42 98 IPR001471 GO:0003700|GO:0006355
Mibi09g1532 285 SUPERFAMILY DNA-binding domain 43 99 IPR016177 GO:0003677
Mibi09g1532 285 Pfam AP2 domain 45 91 IPR001471 GO:0003700|GO:0006355
Mibi09g1532 285 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Mibi09g1532 285 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Mibi09g1532 285 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Mibi09g1532 285 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
Mibi09g1532 285 FunFam Ethylene-responsive transcription factor 2 42 100 - -
Mibi09g1532 285 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 215 - -
Mibi09g1532 285 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1532 Mibi-ChrMibi09 33154343 33155200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1532 11 203 AP2-EREBP Transcription Factor Family AT5G18560 44.583 7.58e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi09g1532 AP2 3e-12 CL0081