Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1527 ATGGAATCCAATCGCCGACGACGATCGACTCGGCGGAGGAGGGAGCAGGAGGAGATGGTGAGGAAAGTAATTTGGCCTTCAATTCGGGGCCATTCTTGTCCTATTTGTTTCACTAATCTCCAACATCACTATAAGCAAGCTGCGATCCTCTCTCTCTGTTTTCACGCTTACTGCATCGATTGTATTCGCAAATGGAGTGTCTTCAAAAGAAACTGTCCTCTCTGTAATTCGAATTTCACCTCTTGGTTCTGTAACCTCAGCCTTTCCTCTAGAGAGTTCCGGAAAGAGGTTTTGCCCTTTGAGGGTTTCCCCAGAAATTCCCATCAAGAAATTAGCTCCAGCCGTCTATATGCTCCTAGGTTCAGACTTCTTCGTAGAACAAGGGTTGCTTTGGATGAAAGGCGAAATAAGGCACTGCCATGGCGGCGATCATTCGGACGTCCTGGACACGCTAGTCCTGAAGTTATTGCTCAAAGGAAACTTGATTGGCGTGCAAGCATATACAAGAAGCAGCTGAAGGCAGTTCCTTTGACCTCTAGCATTCTTGAGCAGATTAATCCAAGAAATAATTTTTTAAGAGAAAAAACGCTACAAAAGATTGAGCCATGGATACGGAGGGAGCTACAAGCTGTGCTTGGTGACCCAGATCCAACTATCATAGTTCATGTGGCAACCTCACAGTACTTTGCATGGCTGAAAGAGAAAGTTAGTTCTGGACAGTCTGATGTTGAAGAGACGTTTATAAAACCCCTGCGGCCTTTCCTGCAAGATAAAGCTATGATCTTTTGGCATGAACTAAGGGCCCCAGGTGCTATGCTGAGAGTTGTTACAATATTGAAACATATGATGCTGTGGTTGAATATAAAAGGCAGGAGTGAGCGAAGAGAAAATACTTGTACTACTACAACTCATATCAATGTGGGAGGATGGAAATTGTGGTGGCACATTCTTTCAGAGCTCATTCCAATGCCAATACAGGACTCTGCTTGTATTTTGACCCAGCCGATTCCTGCTTTTCAAGATGCATTTCATTGGCATTTGGCTTGGCATTCCAGTCAGACAGAAATTTGA 1071 0.4435 MESNRRRRSTRRRREQEEMVRKVIWPSIRGHSCPICFTNLQHHYKQAAILSLCFHAYCIDCIRKWSVFKRNCPLCNSNFTSWFCNLSLSSREFRKEVLPFEGFPRNSHQEISSSRLYAPRFRLLRRTRVALDERRNKALPWRRSFGRPGHASPEVIAQRKLDWRASIYKKQLKAVPLTSSILEQINPRNNFLREKTLQKIEPWIRRELQAVLGDPDPTIIVHVATSQYFAWLKEKVSSGQSDVEETFIKPLRPFLQDKAMIFWHELRAPGAMLRVVTILKHMMLWLNIKGRSERRENTCTTTTHINVGGWKLWWHILSELIPMPIQDSACILTQPIPAFQDAFHWHLAWHSSQTEI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1527 356 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 136 IPR013083 -
Mibi09g1527 356 SMART ring_2 33 75 IPR001841 -
Mibi09g1527 356 ProSiteProfiles Zinc finger RING-type profile. 33 76 IPR001841 -
Mibi09g1527 356 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 5 267 - -
Mibi09g1527 356 Pfam Zinc finger, C3HC4 type (RING finger) 33 75 IPR018957 GO:0046872
Mibi09g1527 356 SUPERFAMILY RING/U-box 32 82 - -
Mibi09g1527 356 ProSitePatterns Zinc finger RING-type signature. 53 62 IPR017907 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1527 9 266 C3H Transcription Factor Family AT2G39100 46.617 4.09e-73 226