Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1484 ATGGATAGCGTCTTCTCCTTCTCTGAAGCCGATAGACTCGATTTCCTCCACTCCGTCCTTAACACTTATGGCTGTTCTTATGTCTGCCTCTGTGGCGTTCCAGGTTTAGCTTTTAGGAACCACCAGTACACCTGCCTAGAGCTGCAACTATCCGATCTCTTAAGATTCGCATGCACTGATATACAAAGACGCTTCTTTCAGGAAGCAAGGATTAAGAAAGCTGTTTTCATAGGATAAGTAGGAAGAGCTAGTGCTTTTACGAGGTACACACCTAATGATTCAGACATAATAACAATTACTTCCAAACCCAGTTTGAGCAGAAGGAAGAAGCAAAGCATGGTAAAGAGATCATTGGAATTGTACAGAGGCTTACATTACATGATAAATATGAGAGAGCGTTATCAATATTCAGCAAGTCGTCCCACTAGTACTACCCACACCCTTCATGTTATATCTGAACGAAGAAGAGGTGAGCAGCTCAATAAGAATTTTCAGGCTCTTAGGTCTCTACTCCCTCCAGGAACCAAGAAATACAAAGGTTCAATACTTAGAGCAGCAAAAGAGAAATTGAACTCTTTGATGGCTGAGATTGAAAATATGACCAAAGGATCATCAGATCTTAATCAGCAAGCAGAGGAAGCACAAATGAAACCCAATAAATCATTATTATTAACAGATCAAGAAACGAAGAAAACCAGCACCTCCAATGAAAGATTGAGTGTGCAAGTCTCATCAGATGTGGTGGGGTCGAGCTTATCACAAGAAAGATTCATCGACCTCCAAGTGACTGTGAGAGGAGGACGGAGAAGCTATAATTCTGAGGTCGAAATATTATTGATTCGCCTATTGGAATTCTTGAAAGAAGTTGAGAGAGTGAGCTTAGTTTCTCTAGACGCTAGCACAACACATATATCACAAGAAGGAGCCGCCATTAATATTGAAGCAACTTTTAGACTCAAGATAGAGGTACGTACATAA 978 0.407 MDSVFSFSEADRLDFLHSVLNTYGCSYVCLCGVPGLAFRNHQYTCLELQLSDLLRFACTDIQRRFFQEARIKKAVFIGXVGRASAFTRYTPNDSDIITITSKPSLSRRKKQSMVKRSLELYRGLHYMINMRERYQYSASRPTSTTHTLHVISERRRGEQLNKNFQALRSLLPPGTKKYKGSILRAAKEKLNSLMAEIENMTKGSSDLNQQAEEAQMKPNKSLLLTDQETKKTSTSNERLSVQVSSDVVGSSLSQERFIDLQVTVRGGRRSYNSEVEILLIRLLEFLKEVERVSLVSLDASTTHISQEGAAINIEATFRLKIEVRT 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1484 325 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 80 322 IPR044658 -
Mibi09g1484 325 Gene3D - 145 222 IPR036638 GO:0046983
Mibi09g1484 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 193 IPR011598 GO:0046983
Mibi09g1484 325 SMART finulus 150 199 IPR011598 GO:0046983
Mibi09g1484 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 146 215 IPR036638 GO:0046983
Mibi09g1484 325 MobiDBLite consensus disorder prediction 203 235 - -
Mibi09g1484 325 CDD bHLH_AtbHLH_like 149 200 IPR045239 -
Mibi09g1484 325 Coils Coil 183 217 - -
Mibi09g1484 325 Pfam Helix-loop-helix DNA-binding domain 148 193 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1484 Mibi-ChrMibi09 32540284 32543079 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1484 81 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 37.643 3.29e-35 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi09g1484 HLH 4.9e-07 No_clan