Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1483 ATGGATACTGTCTTCTCCTTCTCTGAAGCTGCAAGATTTGATTTCCTTCAATCTGCCTTTCATTCTTATGGCTGTGCCTACATTTGCCTCTGGTCCTATTATTCATCATCCAATCGGTTGGTGTTCTTGGATGGATTGTATGACGTACAAAGGCATCAAGCAAGCTCTTCTCTGGGGAGTAGTCTTGATCGAAGGCTTTTTGGTCAATACAGGGGTTTGGAATTTGATATCACTTCTGAAAACCGGATTCCTGGAATGGCCTTTTGGAACCAATATTCTTACCTTGAGCTCCAACAATCTGATCTACTACGACTCGCATGGACTGATATACAAAGGCAATTCTTTCAGACGGCTGTTTTCATAGGTTGCCGCAATGGGGAAATTGAGCTTGGATTCTCATCATCTGTGATCTCTCAAAGTGCTGAGATGATTCAAACAGATGTATTGCAGAACTGGTTTCCAGAAGAATCTTCAAGACAATCCCATTATGCGATTCCACCACCTTCATCTTCATCTAATTCTTTGATATCATCATCACTACAAAATAATGTAGTAATTCCAGAAGAAAGAGTTATTAGTAGTGCTTTTAAGAGGTACGAACCATGTGAAATGGTGGGTAACTACGATGAAATACCCAATATGAGAAGGCAAAGCATGATCAAGAGATCTTTTGAACTGCTTAGAGGGTTACATTTCATGAGAACTAGAGAGGGTTATGAAGCATCACATCACACAAGTAGTTGTCACTTCCTTCATATGTTGTCAGAACGAAGGAGGCGTGAGAAACTCAATCGGCATTTTCAAGCACTTAGATCTCTGCTCCCTCCAGAAACCAAGGGGAGTGAATGGGATGAGGGTGCCTTCGAAGAAGCTGTGAGAAGAGTTGTTGCTGACGCGGCAAAGTGA 906 0.4183 MDTVFSFSEAARFDFLQSAFHSYGCAYICLWSYYSSSNRLVFLDGLYDVQRHQASSSLGSSLDRRLFGQYRGLEFDITSENRIPGMAFWNQYSYLELQQSDLLRLAWTDIQRQFFQTAVFIGCRNGEIELGFSSSVISQSAEMIQTDVLQNWFPEESSRQSHYAIPPPSSSSNSLISSSLQNNVVIPEERVISSAFKRYEPCEMVGNYDEIPNMRRQSMIKRSFELLRGLHFMRTREGYEASHHTSSCHFLHMLSERRRREKLNRHFQALRSLLPPETKGSEWDEGAFEEAVRRVVADAAK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1483 301 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 248 284 IPR036638 GO:0046983
Mibi09g1483 301 CDD bHLH_AtbHLH_like 252 279 IPR045239 -
Mibi09g1483 301 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 247 301 IPR011598 GO:0046983
Mibi09g1483 301 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 108 280 IPR044658 -
Mibi09g1483 301 Pfam Helix-loop-helix DNA-binding domain 252 279 IPR011598 GO:0046983
Mibi09g1483 301 Gene3D - 248 291 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1483 Mibi-ChrMibi09 32473812 32480088 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1483 1 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 30.311 2.18e-35 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi09g1483 HLH 4.4e-06 No_clan