Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1460 ATGGTGCATAATGGCACTTTACTGGGGAAAAAATATAATGTGAGTGAAACATTGACTGTAAAGAAAAACGTGAGGGTATTGGGACCACATCATCAGTGTGTAAAGGCAGTGAACCAGTGGCGCAACCTCCCCAAACGAGCAGGTTTGAAAAGATGTGGGAAAAGTTGCAGACTTCGATGGCTTAACTATCTCAGGCCAGACATCAAGAGAGGCAATATCACCCCTGATGAAGAAGAGCTTATTGTCCGCCTTCACAAGCTCTTGGGAAACAGATGGTCTCTTATAGCGGGGAGGCTTCCAGGGCGAACAGACAATGAAATAAAGAACTACTGGAACACTAATTTAGGCAAGAAACTCAAGCACCAAAACATTAATGTTGCTCCCTCTGCTCAACCTAAGACGACATTAACAGACATAACTCCCAAGAATGAAGCAGATACAAAATCGAACCCCCTCTTCAACAATATCGTCCGTACAAAAGCCACCAAGTGCTCTAAGGTCATCATCACCACCCCACCTCCTTCCAACCCTCAAGTAGAGCCTCCGTGCCATCATCAGCCCGCCGCCGCGGTGGCTAAAGGCGGTAACCGGACAACAACGGAATCGCTCAGGGCCGTCGATGAGAAGGATAATCATCATCATGGGGATTTTTTGATGGCGGATTTCAACGTGGGAGAGATATGTTTGTCGGATCTTTTGAACTCGGATTTCTCAGACATGTGTGACTTCAGTAACAACAGCGTCGACGGCGGCGGGTTGTCGCCGTCGTCGGACCAACCGTTCGTGTTTTCCGATGAGGCTTTGAATGACTGGACGCATAGCAACGTGGGGGACACAAATGTGGACAATGATAATCTTCACTCTCTCACTTCCTTCCTTGAGTCCAGTGCGGAATGGCTAGCTAGCTAG 909 0.4796 MVHNGTLLGKKYNVSETLTVKKNVRVLGPHHQCVKAVNQWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITPDEEELIVRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKLKHQNINVAPSAQPKTTLTDITPKNEADTKSNPLFNNIVRTKATKCSKVIITTPPPSNPQVEPPCHHQPAAAVAKGGNRTTTESLRAVDEKDNHHHGDFLMADFNVGEICLSDLLNSDFSDMCDFSNNSVDGGGLSPSSDQPFVFSDEALNDWTHSNVGDTNVDNDNLHSLTSFLESSAEWLAS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1460 302 FunFam MYB transcription factor 71 129 - -
Mibi09g1460 302 Gene3D - 12 69 - -
Mibi09g1460 302 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Mibi09g1460 302 SUPERFAMILY Homeodomain-like 50 125 IPR009057 -
Mibi09g1460 302 CDD SANT 11 64 IPR001005 -
Mibi09g1460 302 SMART sant 8 66 IPR001005 -
Mibi09g1460 302 SMART sant 69 117 IPR001005 -
Mibi09g1460 302 ProSiteProfiles Myb-like domain profile. 11 64 IPR001005 -
Mibi09g1460 302 MobiDBLite consensus disorder prediction 175 199 - -
Mibi09g1460 302 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 38 188 - -
Mibi09g1460 302 Pfam Myb-like DNA-binding domain 35 64 IPR001005 -
Mibi09g1460 302 Pfam Myb-like DNA-binding domain 70 115 IPR001005 -
Mibi09g1460 302 CDD SANT 74 115 IPR001005 -
Mibi09g1460 302 Gene3D - 74 144 - -
Mibi09g1460 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1460 Mibi-ChrMibi09 32217356 32218754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1460 38 125 MYB Transcription Factor Family AT3G13540 78.409 4.62e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi09g1460 Myb_DNA-binding 2e-14 CL0123