Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1452 ATGGCTGACATCCAAAGCCCATTAACACTTCCATCACCATCTCCTCCTCCTCCTCCATCATGGTCATCATCTTCTTCTTCATCATCATCAAAAACAGGCATGACCATGCTCTACTATGGCCTTGCGGTGGTAGGAACCGCAGCCATAGTGTTAGCCATGTACAATCTCATCATCATCAGACGCTGCAGCCGCCGGCACCGGCGAAGAGGGGAGGGGGAAGACCGGGCAGTGGAGGTGGTGATAGGGGTCGCCGGAGGTAGTAGTAGCCGCAGCTTTGAATGCTCAAACAGGAATTTGCTTTCAAGCTTCAGGTATAAGAAAGAAATAGAGGAGAAGGATGAAGGAATTGGTGGTGGTGAATATGAATGCCCTGTTTGTTTAATGGTGTTTGAAGAAGGTGAAGAAGTTAAGAAGCTACCAAGGTGTAATCATTCGTTTCATGCTGTTTGTATAGATATGTGGCTTTATTCTCACTTGGATTGCCCAATTTGTAGAACCCATGTTGGCTTAACAGAGTGA 519 0.4682 MADIQSPLTLPSPSPPPPPSWSSSSSSSSSKTGMTMLYYGLAVVGTAAIVLAMYNLIIIRRCSRRHRRRGEGEDRAVEVVIGVAGGSSSRSFECSNRNLLSSFRYKKEIEEKDEGIGGGEYECPVCLMVFEEGEEVKKLPRCNHSFHAVCIDMWLYSHLDCPICRTHVGLTE 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1452 172 ProSiteProfiles Zinc finger RING-type profile. 123 165 IPR001841 -
Mibi09g1452 172 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 26 168 IPR044675 -
Mibi09g1452 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 170 IPR013083 -
Mibi09g1452 172 SUPERFAMILY RING/U-box 109 169 - -
Mibi09g1452 172 Pfam Ring finger domain 122 165 IPR001841 -
Mibi09g1452 172 MobiDBLite consensus disorder prediction 1 28 - -
Mibi09g1452 172 CDD RING-H2_EL5_like 122 165 - -
Mibi09g1452 172 SMART ring_2 123 164 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1452 Mibi-ChrMibi09 32016180 32016698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1452 41 168 C3H Transcription Factor Family AT5G17600 32.143 1.51e-17 76.6