Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi09g1448 | ATGCTTACGTGCATAGCTCGTCCCAAGAAACCCGGGAGTGACTCGCTGAGTCAACCCGACGATTCCGATTCCAAAAACCAAGCCATCAAATCCCTAACCTCTCAGATTAAGGATATGGCGTTGAAAGCATCGGGAGCGTACAAGCATTGTAGCCCCTGCACGGGACCGTCTACACAGACACGAATCGGGAGCAATATCGAGTCAGACACAGATTCAGATCGTTACAGGTGGTCGTACAGGAGAACAGGGAGTTCAAGCTCGACGACGACGACGACGAGGGGATGGGGGAAGGAAATGGAAGCGAGATTGAAGGGGATTTCGAGTGGTGAAGGGACACCGAACTCGTCGAGTGGACGCCGAGTTGACCCGGTGGTGTTGTTCGTCGAAGAGAATGAGCCGAAGGAGTGGGTGGCTCAGGTAGAACCAGGCGTTCTGATCACATTTGTTTCGCTTCCTCGTGGAGGGAATGACCTGAAGCGAATACGGTTCAGTCGCGAGATGTTTAATAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTACGACAAAGTTATGGAACTTTACAACGTTCGAAGGTTTAACCGCCAAGCTTTCCCTCTTCCTACGCCACCAAGATCCGAAGATGAGAGCTCAAAGATTGAATCAGCGGAAGACAGCCCAGTGACACCTCCACTAACTAGGGAACGCTTACCTCGTAATTTGTACCGTCCTCCTGGAATGGGAATGGGATACTCATCCTCTGATTCCTTTGATCATCAATCAATGCAATCCCGGCATCCCTATGACTCCAATGGCATGAACTCAACTCCTAAAGTTTCCACCATTAGCGCAGCCAAGACAGAAATATCATCAATGGACGCCTCCATGAGAAGTAGCTCCTCCAGAGAAGCTGATCGCTCCGGGGATTTTTCTATGAGCAATGCCAGCGATCTGGAGACTGAATGGGTTGAGCAGGATGAACCTGGGGTTTATATTACCATCAGAGCATTACCGGGTGGCAAAAGGGAGCTCAGAAGAGTCAGATTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGATTATGGTGGGAAGAGAACCGCGCCAGAATACATGAACAATACTTGTAA | 1107 | 0.4977 | MLTCIARPKKPGSDSLSQPDDSDSKNQAIKSLTSQIKDMALKASGAYKHCSPCTGPSTQTRIGSNIESDTDSDRYRWSYRRTGSSSSTTTTTRGWGKEMEARLKGISSGEGTPNSSSGRRVDPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVRRFNRQAFPLPTPPRSEDESSKIESAEDSPVTPPLTRERLPRNLYRPPGMGMGYSSSDSFDHQSMQSRHPYDSNGMNSTPKVSTISAAKTEISSMDASMRSSSSREADRSGDFSMSNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYL | 368 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi09g1448 | 368 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 134 | 188 | IPR013591 | - | |
| Mibi09g1448 | 368 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 312 | 367 | IPR013591 | - | |
| Mibi09g1448 | 368 | MobiDBLite | consensus disorder prediction | 15 | 33 | - | - | |
| Mibi09g1448 | 368 | PANTHER | PROTEIN BREVIS RADIX-LIKE 1 | 1 | 368 | IPR044532 | - | |
| Mibi09g1448 | 368 | MobiDBLite | consensus disorder prediction | 246 | 269 | - | - | |
| Mibi09g1448 | 368 | ProSiteProfiles | BRX domain profile. | 134 | 189 | IPR013591 | - | |
| Mibi09g1448 | 368 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
| Mibi09g1448 | 368 | ProSiteProfiles | BRX domain profile. | 313 | 368 | IPR013591 | - | |
| Mibi09g1448 | 368 | MobiDBLite | consensus disorder prediction | 283 | 307 | - | - | |
| Mibi09g1448 | 368 | MobiDBLite | consensus disorder prediction | 51 | 66 | - | - | |
| Mibi09g1448 | 368 | MobiDBLite | consensus disorder prediction | 48 | 70 | - | - | |
| Mibi09g1448 | 368 | Pfam | Transcription factor BRX N-terminal domain | 27 | 53 | IPR027988 | - | |
| Mibi09g1448 | 368 | MobiDBLite | consensus disorder prediction | 199 | 269 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi09g1448 | Mibi-ChrMibi09 | 31978698 | 31985390 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi09g1448 | 1 | 368 | Major Intrinsic Protein MIP | AT1G31880 | 45.833 | 1.65e-94 | 285 |