Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1423 ATGTGTGCTTCGTTTGTTATGTGTTTGTCGTTTACATCAGAGATAGAGTCGACGGAGGAGCAGAGGAAGAAGTCAATGTTTGCGACAACAACAGAAGAACCAACAACCTCAAGGGTCAGAAGATCCGAGATTGTTCCTTGCTTGTCCTGTCCTTTGTGCCATGAACTGTTCAGAGACGCCACCACTATTTCTGAATGCTTGCACACCTTTTGTAAGGAGTGCCTATGGAAGAAGTTCAATGATGAGGGTGAGACGCATTGTCCAGTATGTAATAAGTACTTGGGTTGTTATCCACTTGACAGGACAAGACATTTTACATTTTACGAGCCTGAGCTTGAGCCTGAGCCTGAGCCTGTGCTTGTGCATGTGCCTGTGTTGGTATCTGAGCCTAAGTTTGTGCCTTCCATTCCATTGCCAACGAATTTCAAGAAGGAGAAGCCTCTCACTTCATTAGGCTCCGGTTCAACTCAGCTATCAAGCCATTCTTGTTTAGTTGAAAGAAGGGCGAAAACCGCGGCAAAAAAATTCTTGAATGAACAAGAATATGCTCTTGCTGCCTTTCAATTGGAGAAAAAATCAGCTGGTAAGAAACATGGAAGACTGAATAATGGGGTAGTAATACGGGAGGGCTCTCCTAAAAACTTATCAAGAACAAAATCTGTAGCAAGGAAAAAAACCATTCCAAAAGAATACATTCCCTCTTCAAGTCAACCTCAGCCTCTGAAAGTAGCTGAAGATAACAAGACGGACCAGGAACACAATCCTATTCCAAAAGAATACATTCACTCTACTAGTCAACCTCAGCCTCTGAAAGTAGCACGAGATCATAACAAGACAGACCAGGAAAACAGTGAGCTTGTAACTGAAAATGGGACAAGTGAAATTGAGAATCGGAAGACTCCCTTTGAACCAGATTTGAACCAGCCAATAGTGCCCAATGAAGCTCCTGACAAAAATGCTCCATTGTGGAAAGGAAAAGCTCCAATGTGGGAGCCCTTGAACTACTTAATGGAAGCTGCAGAAAATGCAAAGTCTATGGAGTCCAACAATATGCAAGAAAATGCTAATGATGCTGTGCCTGTTGAATCTTGCAACAATGGATTCAATAATCCTATCAAAATTGTGGCAGCTAGTGATCAAATTGAGGCGACTCCGGTTCAACCAAATCCCATCAAAACTAAGGGGTCTTGGAACAAACAAAAAAGAAAAGTCAAATTTGCTCATGACTTGAATGTTCCCGCAGAACCTTTACCTGATGGTTTAAGCATCCAATGCAACGAAAGAATCACTCCAATATGGATCTCTTTAGTTGCTTCTGAAGAGGGGGACATACGTGCACGCTTGCCACAGATACCTTCCCGCTTCATAAGGATCAGGGATGTCAATGTACCTGTTGAATTCATCAAGAAGTATGTAGCAAAGAAGCTTGGTCTCGCAAGCGAAGCCGAGGTGGAAATCTCATTAATGGGAAAGCCATTGTTACCTTCACTGCAACTGAAGGATGTAGCAGCGATGTGGTTAGATACAGTGCCAAAGTCTAAGATGATTCATTCCTTTGTTGGAGACTCAGCAGAGGATTTTGTGATGGTTCTTTCCTATGGTCGAAAGGCAATTAGGCCCACCATTCATTAG 1632 0.4277 MCASFVMCLSFTSEIESTEEQRKKSMFATTTEEPTTSRVRRSEIVPCLSCPLCHELFRDATTISECLHTFCKECLWKKFNDEGETHCPVCNKYLGCYPLDRTRHFTFYEPELEPEPEPVLVHVPVLVSEPKFVPSIPLPTNFKKEKPLTSLGSGSTQLSSHSCLVERRAKTAAKKFLNEQEYALAAFQLEKKSAGKKHGRLNNGVVIREGSPKNLSRTKSVARKKTIPKEYIPSSSQPQPLKVAEDNKTDQEHNPIPKEYIHSTSQPQPLKVARDHNKTDQENSELVTENGTSEIENRKTPFEPDLNQPIVPNEAPDKNAPLWKGKAPMWEPLNYLMEAAENAKSMESNNMQENANDAVPVESCNNGFNNPIKIVAASDQIEATPVQPNPIKTKGSWNKQKRKVKFAHDLNVPAEPLPDGLSIQCNERITPIWISLVASEEGDIRARLPQIPSRFIRIRDVNVPVEFIKKYVAKKLGLASEAEVEISLMGKPLLPSLQLKDVAAMWLDTVPKSKMIHSFVGDSAEDFVMVLSYGRKAIRPTIH 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1423 543 Coils Coil 336 356 - -
Mibi09g1423 543 ProSitePatterns Zinc finger RING-type signature. 66 75 IPR017907 -
Mibi09g1423 543 SMART ring_2 50 90 IPR001841 -
Mibi09g1423 543 Pfam RING-type zinc-finger 50 88 IPR027370 -
Mibi09g1423 543 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 37 536 IPR044807 GO:0004842
Mibi09g1423 543 Gene3D - 421 516 - -
Mibi09g1423 543 MobiDBLite consensus disorder prediction 230 244 - -
Mibi09g1423 543 MobiDBLite consensus disorder prediction 208 323 - -
Mibi09g1423 543 MobiDBLite consensus disorder prediction 258 272 - -
Mibi09g1423 543 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 112 IPR013083 -
Mibi09g1423 543 ProSiteProfiles Zinc finger RING-type profile. 50 91 IPR001841 -
Mibi09g1423 543 SUPERFAMILY RING/U-box 43 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1423 Mibi-ChrMibi09 31651759 31656433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1423 32 459 C3H Transcription Factor Family AT2G30580 24.201 3.24e-29 116