Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1412 ATGTCTACCTGTTTAAGTGGAGCTAGTGGAAGAACTTACGGCTTCGATTTCGATTTCCTCAAATCCCCATCTACTTCCACCACCAGAACTTCTCACACATCTTCTTCTCCTTCCTCAACTATCTCTGAATCCACCGATTCTCCTCTCGCTATCTCCACTCGTAAATCTCGAACTCCTCGAAAACGACCCAATCAAACTTACAATGAAGCCGCCGCAATGCTTTCTACAGCTTACCCTAATCTCTTCACCTCCGATTCCCTCAAAAAACCACGCAAACTCACCAAAGTTACTGATAATTTTGCTGATGAATATTCCCAATTGTTCTTCCCTTTCCAAGCTTTTGACACCTCCTCTTTCCTAATTCAACACCAACCAGTTCATCATAAGGATGTGAATTTCCCAATGGAGCCTAAAGCCGTGAATCTAGCAGAAAAAGCGTGTCAGAGTCCAGGGGAGATCAGCTCGCGAGTGAAAACTAATTATATTAATAATAATAACAACAACAATAATACTCAGGAATTTGAGGATGATATTTGTGGTGGTGAAGATTTCGATGCTGAATCGATTCTCGATGAGGAAATCGGCGAGGGAATCATTGATAGCATCATGGGAAGCAGGGTTGAGGATTCTCACGGCGGCGACGGCGCGTGTGGTCACGACGAACACGTGAACCACCGGACTCATCTGGATTCGGATTTTGGCGGGAAATTCGATTTCCGGCTACGAGCTCTACGTGGAGTCGATGAAGGGAACTACTACTGTTGGGGATTTCCGGCAGTTGTCAACATGATTGAAATCTCGCCGGAGATGAAGAAGCCTGCTCCGGCGACGGAGACAGTGTCGCCGGAGAAGAAGGCGAAGAAGAAGAAGAAGATAAAGACGAAGAAGGTGGAGAAGCTGACGAACATCGAATCGAAGATTCCGACGGAATTGCCGAAGGAAAGTTCGGTTCCGGAGGCGAAATCGAATCCTGGTTTGCTGTTGAAGTTGAATTACGGCGAGGTTTTGGATGCTTGGTCTGACCGGAGCTCGCCGTTCACCGGTGAAAGCCCGGCTTCTGACGTCGCCGGAAACGATATCACGGCAAGGCTGGCACAGATAGATTTATTGTGGGAGAATGGAGAAGGAGTAATGAGAGAAGCTAGTGTGATGCGTTACAAAGAAAAGCGTCGTACACGTCTCTTCTCTAAGAAGATTAGATATCAAGTCAGAAAAGTCAACGCTGATCAACGGCCTAGATCGCAGGGGCGATTTGCTAGGAGGCCCAATGGTTGCTCTAATGCACAAAGCTCGAAGAGTAAAGCAGGCCTTACGTCCCATCACTCTCAATAA 1332 0.47 MSTCLSGASGRTYGFDFDFLKSPSTSTTRTSHTSSSPSSTISESTDSPLAISTRKSRTPRKRPNQTYNEAAAMLSTAYPNLFTSDSLKKPRKLTKVTDNFADEYSQLFFPFQAFDTSSFLIQHQPVHHKDVNFPMEPKAVNLAEKACQSPGEISSRVKTNYINNNNNNNNTQEFEDDICGGEDFDAESILDEEIGEGIIDSIMGSRVEDSHGGDGACGHDEHVNHRTHLDSDFGGKFDFRLRALRGVDEGNYYCWGFPAVVNMIEISPEMKKPAPATETVSPEKKAKKKKKIKTKKVEKLTNIESKIPTELPKESSVPEAKSNPGLLLKLNYGEVLDAWSDRSSPFTGESPASDVAGNDITARLAQIDLLWENGEGVMREASVMRYKEKRRTRLFSKKIRYQVRKVNADQRPRSQGRFARRPNGCSNAQSSKSKAGLTSHHSQ 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1412 443 MobiDBLite consensus disorder prediction 23 54 - -
Mibi09g1412 443 MobiDBLite consensus disorder prediction 404 443 - -
Mibi09g1412 443 ProSiteProfiles CCT domain profile. 379 421 IPR010402 GO:0005515
Mibi09g1412 443 MobiDBLite consensus disorder prediction 420 443 - -
Mibi09g1412 443 MobiDBLite consensus disorder prediction 272 291 - -
Mibi09g1412 443 MobiDBLite consensus disorder prediction 23 64 - -
Mibi09g1412 443 Pfam CCT motif 379 421 IPR010402 GO:0005515
Mibi09g1412 443 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 12 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1412 Mibi-ChrMibi09 31534376 31538346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1412 326 421 C2C2-CO-like Transcription Factor Family AT1G73870 46.491 9.35e-21 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi09g1412 CCT 7.4e-17 CL0281