Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1409 ATGGAGAATATAGGCGAAGAGTATAGACATTACTGGGAAACCAACAGGTTCCTCCAAACCGAAGAGCTCGACAGTTGGGGATGGGACGAGGCTTTCTCTGGCTACTACGATTCCAGCTCACCCGACGGCGCCGCCTCCTTCGCCGCCTCCAAGAACATCGTCTCCGAGCGCAACCGCCGCAAGAAGCTCAACGAACGCCTCTTCGCCCTCCGCGCCGTCGTCCCCAACATCTCCAAGATGGATAAGGCTTCTATAATTAAGGATGCGATTGATTACATCCAGCACCTGCACGAGCAGGAGAGGAATATTGAGGCGGAGATTTCTGATCTTGAATCTGGGAAGCAGATCAAGCAGAATTCTAGTGATATTGATTATGAACAGGACCTCCCTGTGTTGCTCAGGTCCAAGAAGAAGAAAACGGAGCAGCATCATCAGATTTATGATACTGTTGTCACTTCTAGAAATTCCCCCATCGAAGTCCTTGAGTTGAAGGTGACTTACATGGGAGAGAAGACGGTGGTGGTGAGCTTGACTTGTAGTAAAAGGACGAACACGATGGTGAAACTATGTGAGGTGTTTGAATCTCTGAAGCTCAAGATTGTTACTGCCAACATAACTTGTTTCTCAGGCAGGCTTGTGAAGACTGCCTTCGTGGAGGCAGATGAAGAAGAGAAAGATCTATTGGAGATGAGAATCCAAACGGCCATTGCAGCTCTTAATGACCCTGATAGCCCTATGAGCATATAA 747 0.4833 MENIGEEYRHYWETNRFLQTEELDSWGWDEAFSGYYDSSSPDGAASFAASKNIVSERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIDYIQHLHEQERNIEAEISDLESGKQIKQNSSDIDYEQDLPVLLRSKKKKTEQHHQIYDTVVTSRNSPIEVLELKVTYMGEKTVVVSLTCSKRTNTMVKLCEVFESLKLKIVTANITCFSGRLVKTAFVEADEEEKDLLEMRIQTAIAALNDPDSPMSI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1409 248 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 44 115 - -
Mibi09g1409 248 Gene3D - 47 113 IPR036638 GO:0046983
Mibi09g1409 248 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 47 233 - -
Mibi09g1409 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 111 IPR036638 GO:0046983
Mibi09g1409 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Mibi09g1409 248 Pfam Helix-loop-helix DNA-binding domain 54 97 IPR011598 GO:0046983
Mibi09g1409 248 Coils Coil 93 113 - -
Mibi09g1409 248 SMART finulus 53 102 IPR011598 GO:0046983
Mibi09g1409 248 Coils Coil 218 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1409 Mibi-ChrMibi09 31476135 31481712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1409 1 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 60.811 5.73e-84 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi09g1409 HLH 4.9e-12 No_clan