Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1402 ATGCATGGTCAAAGTTATATCGTTTTCGGAACGATGAGTCTCTTGACGAACTCGTTTCGTAACCGGAGTGACATTGAGGCTGGAAGTAGCAGCCATGGCGATCATGACGATGGGGAAAGTTCGTCTGATCCATTTGTTATTCCCAGAACAAAGGACGCTCCTATTGAACGCCTCAAACGTTGGAGGCAAGCTGCGCTTGTGCTTAATGCTTCTCGTCGGTTCCGTTACACGTTGGACTTGAAAAAAGAAGAGGAGAAACGGCAAATACTGGGGAAGGTTAGGGTACAAGCAGAAGCAATTAGAGCTGCAATTCTGTTCCAAGCTACTATAAACTGTGGGGCCGCGGCCGCGACCACAAACACGACCGGAATCACACCTTCCCATCCAACCTCAGTTGGTGACTTCGGTATTGGAAAGGAACAACTTCTTTCAATTTCTAAGGATCATAAAGGTGATGTTCTCGAGCAATATAGAGGCGTTAGAGGGCTATCAGAATTGTTGAAATCTAGTACAGAGAAGGGGATTAATGGTGATGATGCAGATCTGTTAAAACGAAGGAATGCTTTTGGTTCAAACAATTATCCTCGAAAGAAAGGAAGGAATTTCTGGATGTTTATGTGGGATGCTTGCAAGGATCTGACCTTGATTATATTAATGGTAGCTGCGGCAGCTTCATTAGCACTAGGAATAAAATCTGAGGGCATCAAGGAAGGATGGTACGATGGGGGAAGCATTGCTTTTGCAGTAATTCTTGTTATTGTTGTTACAGCTGTTAGTGATTATAAACAGTCTCTTCAGTTTCAACTTCTAAATGAGGAGAAGAAAAATATACATTTAGAGGTCATAAGAGGTGGTAGAAGAGTTGATATCTCTATATATGACATCGTTGTTGGTGATGTTGTTCCCCTTAATATTGGTAATCAGGTCCCTGCTGATGGTATCTTGATCACTGGTCACTCTCTTGCTATTGATGAATCAAGTATGACGGGAGAGAGCAAGACGGTCTATAAGGACTCTAGAAACCCTTTTCTGATGTCTGGATGTAAAGTTGCTGATGGCAGTGGCACCATGCTGGTACTCGGAGTTGGTATAAATACTGAATGGGGGCTTCTTATGTCTAGTATTTCAGAAGACAATGGTGAAGAAACGCCCTTACAGGTACGTTTAAATGGTGTTGCCACTTTAATTGGTATAGTCGGCCTCTCTGTTGCTGCTATCGTTTTGATTGTGTTGTTGGCCAGATATTTCTCTGGGCATACTAGAGATGCAACTGGAAATGTTGAATTTAAGGCAGGCAAGACGAAAGTTGATGATGCGATTAATGGGGCAATTAAAATAGTTACAGTTGCGGTGACCATTGTTGTAGTTGCTGTGCCTGAAGGGCTTCCTCTAGCAGTTACCTTAACGCTTGCCTACTCGATGAGAAAAATGATGGCGGACAAAGCTTTGGTGAGGAGGCTTTCAGCATGTGAGACAATGGGCTCTGCCACGACCATTTGCAGTGATAAGACTGGTACATTGACCATGAATCAGATGACTGTGGTTGAGGCTTACAGTGGTGGGAAGAAGATTGCTCCACCTCACAACAAGTCAGAGCTCTCTCCGAATCTCAGCACCTTGATCATTGAAGGTGTTTCACAGAACACCAATGGCAGTGTCTATAAAGTTGGGGGCGATGTTGAGGTTTCTGGATCACCAACAGAAAAGGCAATTTTACATTGGGGAATAAAGCTGGGGATGAATTTTGAGGCTGCCAGATCAGAGTCATCAATTATTCATGTTTTTCCATTTAATTCAGAGAAAAAGCGTGGAGGAGTTGCAGTAAAGACGTTTGACTCTCAAGTTCATATACATTGGAAAGGCGCTGCTGAGATAGTCCTAGCCTGTTGTACATGGTATATTGATGCAAATGGCCAGTTAATGAAGATGGATGATGAGAAGATGAAATTTTTTCAAAAAGCTATTGAAGATATGGCTGCTGATAGTTTACGTTGTGTTGCCATGGCATATAGATCATATGAAATGACAAGTGTTCCAACTAGTGAAGAGGAACTTGCTCACTGGTCATTACCGGAGGATGATCTCATTTTACTGGCTATTGTTGGTCTGAAGGATCCCTGTCGACCTGGTGTCAAAGTAGCTGTGCAACTTTGCCAAAAAGCAGGAGTTAAGGTACGAATGGTGACTGGTGACAATATAAAAACTGCTAAATCAATAGCTGTAGAGTGTGGAATACTTCGATCATTGGAAGAAGCTGTGGAGCCGATGATCTTTGAAGGAACAGTGACAAACATCAAGGATGAACCAAACATCATTGAAGGGAAATCATTTCGTGCATTGCTAGATGATGAGAGAGAGAAAATTGCCGAAAGCTTACTGGTTATGGGACGGTCTTCTCCTAATGACAAGCTTCTGCTTGTGCAAGCATTGAGGAGGAAAAAGCATGTTGTGGCTGTTACTGGAGACGGAACTAACGATGCTCCTGCCCTACATGAGGCTGATATAGGTCTTGCAATGGGTATTCAAGGGACAGAAGTTGCTAAAGAAAGTTCAGATATCATTATTTTAGACGACAATTTTGCTTCGGTTGTGAAGGTTGTCAGATGGGGGCGGTCTGTGTTTGCAAATATTCAGAAATTTATCCAGTTCCAACTTACTGTCAATGTTGCTGCTCTTGTTATTAATGTCGTTTCTGCAGTTTCATCTGGCAATGTTCCACTAAATGCAGTACAGCTTCTTTGGGTAAATCTTATCATGGATACACTTGGAGCACTAGCCTTGGCAACTGAACCACCTACAAATCATTTGATGGATCAGCCTCCAGTTGGCAGGAGTGAACCTCTTATAACACACCACATGTGGAGGAATCTGCTTATACAGGCTGCGTATCAAGTGTCTGTTTTGCTTGTACTGACTTTCCGAGGGACGACCATACTGAATCTGGAGCATCACTCTGACGCTATGAAAGTGAAGAACAGTTTAATATTCAATGCATTTGTCCTCTGTCAAGTCTTTAACGAATTTAATGCTCGAAAGCCAGACGAAAGGAACATATTCAGAGGAATCACAAAAAACTACCTCTTTATAGGGATAGTGGCCTTAACTGTCATACTTCAGGTTATCATAATTGAATTCTTGGGGAAGTTCACTTCAACAGTGAGGCTTAATTGGAAGCAGTGGCTCATCTGCGTTATCATTGGAATTATCAGCTGGCCTCTTGCTTTTCTTGGGAAATTCATACCCGTTCCAGAGACTCGCTGTCACGAGCGGTTTTATAGCCTTGGCCAATACCTTATAGGGAAACTTTGTTGCGTGCGAACAATCTGA 3327 0.4265 MHGQSYIVFGTMSLLTNSFRNRSDIEAGSSSHGDHDDGESSSDPFVIPRTKDAPIERLKRWRQAALVLNASRRFRYTLDLKKEEEKRQILGKVRVQAEAIRAAILFQATINCGAAAATTNTTGITPSHPTSVGDFGIGKEQLLSISKDHKGDVLEQYRGVRGLSELLKSSTEKGINGDDADLLKRRNAFGSNNYPRKKGRNFWMFMWDACKDLTLIILMVAAAASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAVSDYKQSLQFQLLNEEKKNIHLEVIRGGRRVDISIYDIVVGDVVPLNIGNQVPADGILITGHSLAIDESSMTGESKTVYKDSRNPFLMSGCKVADGSGTMLVLGVGINTEWGLLMSSISEDNGEETPLQVRLNGVATLIGIVGLSVAAIVLIVLLARYFSGHTRDATGNVEFKAGKTKVDDAINGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAYSGGKKIAPPHNKSELSPNLSTLIIEGVSQNTNGSVYKVGGDVEVSGSPTEKAILHWGIKLGMNFEAARSESSIIHVFPFNSEKKRGGVAVKTFDSQVHIHWKGAAEIVLACCTWYIDANGQLMKMDDEKMKFFQKAIEDMAADSLRCVAMAYRSYEMTSVPTSEEELAHWSLPEDDLILLAIVGLKDPCRPGVKVAVQLCQKAGVKVRMVTGDNIKTAKSIAVECGILRSLEEAVEPMIFEGTVTNIKDEPNIIEGKSFRALLDDEREKIAESLLVMGRSSPNDKLLLVQALRRKKHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVFANIQKFIQFQLTVNVAALVINVVSAVSSGNVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMDQPPVGRSEPLITHHMWRNLLIQAAYQVSVLLVLTFRGTTILNLEHHSDAMKVKNSLIFNAFVLCQVFNEFNARKPDERNIFRGITKNYLFIGIVALTVILQVIIIEFLGKFTSTVRLNWKQWLICVIIGIISWPLAFLGKFIPVPETRCHERFYSLGQYLIGKLCCVRTI 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1402 1108 FunFam Calcium-transporting ATPase 837 1084 - -
Mibi09g1402 1108 MobiDBLite consensus disorder prediction 27 42 - -
Mibi09g1402 1108 MobiDBLite consensus disorder prediction 25 49 - -
Mibi09g1402 1108 Gene3D - 208 1071 - -
Mibi09g1402 1108 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 507 703 IPR023299 GO:0000166
Mibi09g1402 1108 Pfam E1-E2 ATPase 278 478 - -
Mibi09g1402 1108 PANTHER CATION TRANSPORTING ATPASE 121 1082 - -
Mibi09g1402 1108 SUPERFAMILY HAD-like 498 925 IPR036412 -
Mibi09g1402 1108 SUPERFAMILY Calcium ATPase, transmembrane domain M 158 1082 IPR023298 -
Mibi09g1402 1108 FunFam Calcium-transporting ATPase 208 265 - -
Mibi09g1402 1108 Gene3D - 497 865 IPR023214 -
Mibi09g1402 1108 FunFam Calcium-transporting ATPase 510 706 - -
Mibi09g1402 1108 Pfam Cation transporter/ATPase, N-terminus 159 225 IPR004014 -
Mibi09g1402 1108 PRINTS Sodium/potassium-transporting ATPase signature 493 514 - -
Mibi09g1402 1108 PRINTS Sodium/potassium-transporting ATPase signature 243 263 - -
Mibi09g1402 1108 PRINTS Sodium/potassium-transporting ATPase signature 617 635 - -
Mibi09g1402 1108 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 786 901 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi09g1402 1108 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 441 524 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi09g1402 1108 CDD P-type_ATPase_Ca_PMCA-like 182 953 - -
Mibi09g1402 1108 FunFam Plasma membrane calcium-transporting ATPase 2 704 865 - -
Mibi09g1402 1108 SFLD p-type atpase 482 872 IPR044492 -
Mibi09g1402 1108 Pfam Ca2+-ATPase N terminal autoinhibitory domain 43 85 IPR024750 GO:0005516
Mibi09g1402 1108 Gene3D - 510 706 IPR023299 GO:0000166
Mibi09g1402 1108 FunFam Calcium-transporting ATPase 53 109 - -
Mibi09g1402 1108 FunFam Calcium-transporting ATPase 9 plasma membrane-type 354 524 - -
Mibi09g1402 1108 FunFam Calcium-transporting ATPase 256 376 - -
Mibi09g1402 1108 SUPERFAMILY Calcium ATPase, transduction domain A 278 373 IPR008250 -
Mibi09g1402 1108 Pfam Cation transporting ATPase, C-terminus 905 1080 IPR006068 -
Mibi09g1402 1108 Pfam haloacid dehalogenase-like hydrolase 497 834 - -
Mibi09g1402 1108 SFLD Haloacid Dehalogenase 482 872 - -
Mibi09g1402 1108 SMART Cation_ATPase_N_a_2 154 230 IPR004014 -
Mibi09g1402 1108 Gene3D - 54 108 - -
Mibi09g1402 1108 Gene3D - 181 376 - -
Mibi09g1402 1108 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 150 1082 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mibi09g1402 1108 PRINTS P-type cation-transporting ATPase superfamily signature 500 514 - -
Mibi09g1402 1108 PRINTS P-type cation-transporting ATPase superfamily signature 844 856 - -
Mibi09g1402 1108 PRINTS P-type cation-transporting ATPase superfamily signature 721 731 - -
Mibi09g1402 1108 PRINTS P-type cation-transporting ATPase superfamily signature 699 710 - -
Mibi09g1402 1108 PRINTS P-type cation-transporting ATPase superfamily signature 324 338 - -
Mibi09g1402 1108 PRINTS P-type cation-transporting ATPase superfamily signature 820 839 - -
Mibi09g1402 1108 ProSitePatterns E1-E2 ATPases phosphorylation site. 502 508 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1402 Mibi-ChrMibi09 31289452 31317342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1402 13 1083 Primary Pumps ATPases AT5G57110 71.892 0.0 1545