Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1398 ATGGCCGTAGATCTGGTATCCCTCCCACGCAACATGGAAGAACAACAACATATAGCTATTAAAGAAGCCGCCACCTCTGGTCTTCAAAGCATGCATAACCTCCTTCATCTCCTCAATAATTCCTCCCAATCTGTTCCTTCTGACTGCTCCCACCTCACCGACTTGACAGTCTCCAAGTTCAAACAACTCATCAACCTCCTCAATCGAACAGGCCACGCTCGCTTCCGCCGTTCCCCTTCTTCATCTTCTTCCTCATCCTCTGTTCTTCAAAACCCATCTCTGGATTTGCCTCAAACCTCTTCTAAATCTCAGGGCTTTTCTCTTGATTTCACCAAGCCCTCTAAGTCTCTTGACTTGTCTCTTTCTAAGGACACCTTTAGTATTTCACCTCCCTTGTCTACCACTAGCTCTTCCTTTTTGTCTTCTGTTACCACCGGAGATGGCAGTGTTTCCGATGGGAAGATTGGTCCCTTGCTTCCTCCTCCTCCTCCGCCTCCGCAGGCGGCGGCGGCGGCTCCTGTGGTCTCTTCCGGTAAGCCTCCTCTGTCTTCTTCTCATCGGAAAAGGTGTCACGACTCTGCTTTCTCTCAGAAAACTTCTTCCTCCGCTCACTGCCATTGCTCTAAGAGAAGGAAATCGCGAGTGAAAAAGACGATCCGTGTGCCTGCCATAAGCTCTAAGATCGCTGATATTCCCTCCGACGAGTATTCTTGGAGAAAGTACGGTCAGAAACCCATCAAAGGCTCTCCATACCCTCGGGGATACTATAGGTGTAGTACGGTGAGGGGGTGTCCGGCGAGGAAGCATGTGGAGAGAGCACAAGACGATCCTAAGATGTTGATTGTGACGTATGAAGGGGAGCACCGTCATGCTATAGAAGTGCGTGCGGCGGAGTGCGGCGGCTCCGGCATCGGACTTAGCCTTCAGGCCACCTAG 936 0.5107 MAVDLVSLPRNMEEQQHIAIKEAATSGLQSMHNLLHLLNNSSQSVPSDCSHLTDLTVSKFKQLINLLNRTGHARFRRSPSSSSSSSSVLQNPSLDLPQTSSKSQGFSLDFTKPSKSLDLSLSKDTFSISPPLSTTSSSFLSSVTTGDGSVSDGKIGPLLPPPPPPPQAAAAAPVVSSGKPPLSSSHRKRCHDSAFSQKTSSSAHCHCSKRRKSRVKKTIRVPAISSKIADIPSDEYSWRKYGQKPIKGSPYPRGYYRCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHAIEVRAAECGGSGIGLSLQAT 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1398 311 Pfam WRKY DNA -binding domain 234 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi09g1398 311 Gene3D WRKY domain 221 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi09g1398 311 SMART WRKY_cls 232 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi09g1398 311 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 291 IPR044810 GO:0003700
Mibi09g1398 311 MobiDBLite consensus disorder prediction 156 170 - -
Mibi09g1398 311 MobiDBLite consensus disorder prediction 130 149 - -
Mibi09g1398 311 MobiDBLite consensus disorder prediction 130 197 - -
Mibi09g1398 311 MobiDBLite consensus disorder prediction 74 107 - -
Mibi09g1398 311 ProSiteProfiles WRKY domain profile. 227 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi09g1398 311 FunFam WRKY transcription factor 65 216 293 - -
Mibi09g1398 311 Pfam Plant zinc cluster domain 187 230 IPR018872 -
Mibi09g1398 311 SUPERFAMILY WRKY DNA-binding domain 230 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1398 Mibi-ChrMibi09 31220088 31221573 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1398 1 290 WRKY Transcription Factor Family AT2G24570 53.698 3.25e-93 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi09g1398 WRKY 1.5e-26 CL0274