Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1394 ATGGGAAACTGTCTAGCTCGTCCATCTGATTCTTCAAACTCCCATGGCAGCTCCAACAATGGTGCTAACAACAACCAATTGGGGGGCAGCCAATTACTGGCAGTTAGACACAGTAGTTCGAGACTCTTAGAGAGTACAAGCAATTCAACTTTGCTTGGACGAAGCAGCACATCTGCCGGGAATAGCAGGCTATTCGGACCAAGTAGCAGCAACACATACACAACCAGCAATACTAATACTTCTCTTTTAGGCTCAGATATCAGCCAAACATCTAATGTAAGAGGAGAAGAGGAGTTTCCTAATGGGCAGATCTTGGATGTGGCAAACTTGATAGAGTTCACTTTTGAGCAACTTAAGGCTGCAGCTAGAAATTTCAGAGCTGACTCTGTACTAGGAGAGGGAGGCTTTGGCACAGTGTACAAGGGTTTTCTTAACAGGAGGGCATCATCAACAGGAACAAGAGATGGGCGATTGGCCGTCGCCATCAAGAGATTGAACCCTAATAGCTTACAAGGAGTTATGGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCATCCTAACCTTGTTAAGTTGTTTGGATTCGGAAGGGAAAATGGTGATTTATTTCTGGTGTATGAATTCATGCACAAAGGCAGCTTGGCTAACCAGCTATTCGGGAGAGGTTCAAATGTACGGCCACTTCCATGGGATACAAGGTTAAAGGTTATAATTGGAGCCGCTAGGGGCCTAGACTTCCTGCACTCATTAGAGAATAGAATCATATACAGAGATTTTAAGCCAGCCAATATCCTACTTGACAAGAACTACATTGCCAAGTTATCAGACTTCGGTTTGGCCAAAGCAATTCCTTCTGATGATAGAACTCATGTGACCACAAGGGTTATGGGATCTCAAGGTTATGCTGCGCCTGAGTACGTTGCCACAGGTCGCCTGTCTGTTAAAAGTGATGTGTATGGATTTGGGATTGTTTTGGTGGAGATACTGACAGGAAAAGCAATAAATGATATTCGTAGGCATCTATGTCAGGGAAAATCATTGATCGATTGGCTCAAATCAAATTTGTTGAGTAAAGGAAAGATGATAAGCACAATGGACAGTAAATTGGAGGGGAGATTTCCACCTAGGTTAGCATTACAAGTAGCTCAGCTTGCCCTTAAATGTGTCCAAACGGAACATAAATTCAGGCCATCAATGAGGGAAGTTGTTGAGACATTGGAAAAAGTAGAGGCAGCTCAACTACATGGTCGCCCAGATGGAGGTTGA 1272 0.4371 MGNCLARPSDSSNSHGSSNNGANNNQLGGSQLLAVRHSSSRLLESTSNSTLLGRSSTSAGNSRLFGPSSSNTYTTSNTNTSLLGSDISQTSNVRGEEEFPNGQILDVANLIEFTFEQLKAAARNFRADSVLGEGGFGTVYKGFLNRRASSTGTRDGRLAVAIKRLNPNSLQGVMEWQSEVNFLGRLSHPNLVKLFGFGRENGDLFLVYEFMHKGSLANQLFGRGSNVRPLPWDTRLKVIIGAARGLDFLHSLENRIIYRDFKPANILLDKNYIAKLSDFGLAKAIPSDDRTHVTTRVMGSQGYAAPEYVATGRLSVKSDVYGFGIVLVEILTGKAINDIRRHLCQGKSLIDWLKSNLLSKGKMISTMDSKLEGRFPPRLALQVAQLALKCVQTEHKFRPSMREVVETLEKVEAAQLHGRPDGG 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1394 423 PANTHER OS01G0588500 PROTEIN-RELATED 67 412 - -
Mibi09g1394 423 MobiDBLite consensus disorder prediction 45 95 - -
Mibi09g1394 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Mibi09g1394 423 SUPERFAMILY Protein kinase-like (PK-like) 110 406 IPR011009 -
Mibi09g1394 423 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 211 419 - -
Mibi09g1394 423 CDD STKc_IRAK 131 410 - -
Mibi09g1394 423 ProSitePatterns Protein kinases ATP-binding region signature. 131 163 IPR017441 GO:0005524
Mibi09g1394 423 ProSiteProfiles Protein kinase domain profile. 125 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1394 423 Pfam Protein tyrosine and serine/threonine kinase 128 408 IPR001245 GO:0004672|GO:0006468
Mibi09g1394 423 Gene3D Transferase(Phosphotransferase) domain 1 211 419 - -
Mibi09g1394 423 MobiDBLite consensus disorder prediction 1 27 - -
Mibi09g1394 423 Gene3D Phosphorylase Kinase; domain 1 110 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1394 Mibi-ChrMibi09 31166679 31169129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1394 96 408 Receptor kinase-like Gene Family AT3G58690 43.574 3.90e-80 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi09g1394 PK_Tyr_Ser-Thr 2.1e-45 CL0016