Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1390 ATGGAAGAACATGAGGGTGGAGGATGCAACACAAGGCTGAGTCTTGGCCTGGGGATAGGAGGAGGAGGGTATGTGCCAAAGGCGAAGAAGAAGAAGCAAATGATGAGAGAAAACAATAATCAAGTGGTGGTGCTGGGTCCCTCCTTTGAACTTGGTAGCCCCAAAGGAGATCATCAAGAAACCATTAATAATACAAGGGATCACGAAGAACATGATGGATTGTTCAGAATACAGAGAATAATGGATCATAATATTAACTCCAATAACTCCAGAAAGAAACTGAGGCTCACCAAAGACCAATCTGCTTTGCTAGAAGAAAGCTTCAAACTCCATCCCACTCTTAACCCTGCTCAGAAACATTCTCTTGCTGAGAAATTGAATCTGAGACCAAGGCAGATCGAAGTTTGGTTTCAGAACAGAAGAGCAAGGACCAAATTGAAGCAGACGGAGATAGACTGCGAGTTCTTGAGGAAATGTTGTGAGAATCTGAGGGGTGAGAATCAAAGGTTGAAGAAAGAGTTACAGGAGTTACGTTCACAGAAGGTTGGGGTGAGGACGAGGATGACGACCATGACGTCACCATTATACGTTCAACTCTCAAAGACGACGGCGGCAGCCACGGCTACGTGTTCCTCATGTCAGAAACCATTCAAAGCGAATGATGCAAATAATAATAAAGTGGAGAGTTGGCCTTAG 696 0.444 MEEHEGGGCNTRLSLGLGIGGGGYVPKAKKKKQMMRENNNQVVVLGPSFELGSPKGDHQETINNTRDHEEHDGLFRIQRIMDHNINSNNSRKKLRLTKDQSALLEESFKLHPTLNPAQKHSLAEKLNLRPRQIEVWFQNRRARTKLKQTEIDCEFLRKCCENLRGENQRLKKELQELRSQKVGVRTRMTTMTSPLYVQLSKTTAAATATCSSCQKPFKANDANNNKVESWP 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1390 231 CDD homeodomain 91 148 IPR001356 GO:0003677
Mibi09g1390 231 ProSitePatterns 'Homeobox' domain signature. 122 145 IPR017970 GO:0000981|GO:0006355
Mibi09g1390 231 Gene3D - 83 152 - -
Mibi09g1390 231 SUPERFAMILY Homeodomain-like 88 156 IPR009057 -
Mibi09g1390 231 SMART HOX_1 89 151 IPR001356 GO:0003677
Mibi09g1390 231 Pfam Homeodomain 91 145 IPR001356 GO:0003677
Mibi09g1390 231 ProSiteProfiles 'Homeobox' domain profile. 87 147 IPR001356 GO:0003677
Mibi09g1390 231 Coils Coil 153 187 - -
Mibi09g1390 231 Pfam Homeobox associated leucine zipper 147 180 IPR003106 GO:0006355|GO:0043565
Mibi09g1390 231 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 52 220 - -
Mibi09g1390 231 SMART halz 147 190 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1390 Mibi-ChrMibi09 31106815 31107879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1390 67 215 Homeobox Transcription Factor Family AT4G37790 53.691 8.72e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi09g1390 Homeodomain 5.6e-16 CL0123