Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1388 ATGGACTTTTTTAGTGGCAGTATTCAGGAAATGAGCTATTTTGACTATCAGACCCTGAGGAAGGCAACAATGAATTTTCATCCTGATAATTTTCTTGGAAGTGGTGGATATGGTCCTGTCTTTCGGGGGAAGTTGGCAGATGGGAGGCTAATTGCAGTGAAAACACTGAATCTGAACAAAGCACAACAAGGAGAAAAGCAATTTCTAACAGAGGTGAGACTTATTACAAGCATCCAACACAAAAATCTTGTTCGTCTCCTTGGATGCTGCACCGATGGGCCTCAAAGGATCCTTGTGTATGAATACATGAAGAACAGAAGTTTGGACCTCATAATCAATGGAGACAGTGATCAGTTTCTGGATTGGAGCACTAGGTTTCAAATCATTGTTGGAATTGCACGGGCTTTGCAATACCTGCATGAGGATTCACACATGAGAATTGTTCACAGAGATATCAAAGCAAGCAATATCCTTCTCGACGACAAGTTTCACCCCAAGATCGGAGACTTTGGACTTGCTAGGTTCTTCCCTGAAGACCAAGATTGCCTCAGTACTCAAATTGCTGGAACACTAGGCTATACGGCCCCTGAATATGCTACGAGAGGAGAATTATCAGAAAAAGTAGACATCTACAGTTTTGGAGTTCTATTGCTTGAGATCATCAGCTGCAGAAAGAACACAGATTTTACTTTACCATCAGGAATGCAGTACCTTCCTGAATACGCATGGAAGCTTTATGAGAAATCGATGCTGATGGATCTGGTTGATCCGAAACTACGAGCACACGGTTTTGTAGAGAAGGATGTGATGCAAGCAATTCATGTGGCATTGTTGTGTATTCAATCTAGTGCAAATCTGAGGCCTCCCATGTCAGAAATTGTGGCATTGTTAACCTTCAAAATTGAAATGGTTAAGACTCCAATGAGACCCGTATTCCTAGATCTAAGGCATAAAGTGGCTTCTGCTAATGATGATAAGGGTGATAATGATGATTATGAGAATTGA 1005 0.4139 MDFFSGSIQEMSYFDYQTLRKATMNFHPDNFLGSGGYGPVFRGKLADGRLIAVKTLNLNKAQQGEKQFLTEVRLITSIQHKNLVRLLGCCTDGPQRILVYEYMKNRSLDLIINGDSDQFLDWSTRFQIIVGIARALQYLHEDSHMRIVHRDIKASNILLDDKFHPKIGDFGLARFFPEDQDCLSTQIAGTLGYTAPEYATRGELSEKVDIYSFGVLLLEIISCRKNTDFTLPSGMQYLPEYAWKLYEKSMLMDLVDPKLRAHGFVEKDVMQAIHVALLCIQSSANLRPPMSEIVALLTFKIEMVKTPMRPVFLDLRHKVASANDDKGDNDDYEN 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1388 334 CDD STKc_IRAK 32 298 - -
Mibi09g1388 334 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 103 307 - -
Mibi09g1388 334 Pfam Protein kinase domain 28 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1388 334 SUPERFAMILY Protein kinase-like (PK-like) 9 300 IPR011009 -
Mibi09g1388 334 Gene3D Transferase(Phosphotransferase) domain 1 103 307 - -
Mibi09g1388 334 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 10 320 - -
Mibi09g1388 334 Gene3D Phosphorylase Kinase; domain 1 4 102 - -
Mibi09g1388 334 SMART serkin_6 26 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1388 334 FunFam Cysteine-rich receptor-like protein kinase 10 1 102 - -
Mibi09g1388 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Mibi09g1388 334 ProSiteProfiles Protein kinase domain profile. 26 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1388 Mibi-ChrMibi09 31055876 31058109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1388 14 313 Receptor kinase-like Gene Family AT1G56120 49.667 2.39e-100 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi09g1388 Pkinase 8.3e-47 CL0016