Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1340 ATGGAGTGGGACAGCAATTCGGATCTAAGCGGTGATGACGATGAGACCTTCGCGTTCAACGATAATGGGGGCCCACTTCCCTTCCCTGTTGAAAACTTGCTTCAAACTACTCCTTGTGGGTTCGTCGTCACTGATGCGCTTGAGCCTGACCATCCTATTATTTATGTCAATACTGTGTTTGAGATGGTCACTGGGTATCGAGCAGAGGAAGTGCTTGGTCGCAACTGCCGATTCCTGCAGTGTCGTGGTCCATTTGCTAAAAGAAGGCATCCATTGGTGGACTCTGGTGTAATTGCAGAAATTAGGAGGTGTCTTGATGAAGGGACTGAGTTCCAAGGTGAGTTATTGAACTTTAGGAAAGATGGATCTCCACTGATGAACAGATTGCGGCTCACACCTATATTTGGAGATGATGAGACTATAACACATGTCATTGGAATCCAGTTCTTCACAGAGGCAAATATTGATCTTGGTCCTGTTCTGGGTCCTTCATTGAAGGAATCTGCCAAGTCATCTGATCAATTTCGTTCAGTTCTTTCAGCGTTGAGTCCTCTTTCAGTCGGGGACCGTAATGTAACTCGTGGACTTTGTGGGATTCTACAATTGAGTGATGAGGTACTATCTCTCAAGATACTTGCCCGCTTAACTCCAAGAGATATTGCTTCTGTTGGCTCTGTCTGTAGGCGATTTTATGAAGTGACAAAAAATGAAAATCTCTGGAGAATGGTGTGTCAAAATGCGTGGGGTAGTGAAACTACACGTGTTTTAGAGACTGTGCCTGGTGCAAGGAGACTGGGATGGGTTCGACTGGCAAGGGAATTGACTACTCTTGAAGCAGCAGCATGGAGGAAGGTGACTGTTGGAGGTGCTGTTGAACCCTCACGTTGTAATTTTAGTGCCTGTGCAGTTGGTAATAGGGTTGTGTTATTTGGTGGGGAAGGGGTTAACATGCAGCCTATGAATGATACCTTTGTCCTGGATCTGAACTCTAAAAATCCAGAGTGGCAACACGTCCAGGTGAGTTCTCCTCCTCCTGGTCGTTGGGGCCACACAATTTCCTGTGTGAATGGTTCTAATTTGGTTGTATTTGGAGGCTGTGGAAGGCAGGGCCTGCTCAATGACGTGTTTGTGCTGGACCTTGACGCAAAGCCTCCTACTTGGCGCGAAATATCTGGATTGGCACCTCCGCTTCCCAGATCATGGCACAGCTCCTGTACACTTGATGGTACCAAGTTGATAGTTTCTGGTGGCTGTGCAGATTCTGGAGTACTTTTGAGTGACACATTTCTTCTTGATCTGTCTATGGAGAAACCAGTGTGGAGAGAGATACCTGTAGCATGGACTCCACCTTCTCGTCTGGGGCACACGCTATCTGTTTATGGTGGTAGGAAAATATTAATGTTTGGAGGTCTTGCTAAGAGTGGGCCCCTGCGGTTTCGTTCCAGTGATGTATTCACCATGGACTTAAGTGAGGAGGAACCAGGTTGGAGATGTGTAACTGGGAGTGGAATGCCTGGTGCTGGGAATCCCGGGGGCATAGCCCCCCCTCCTAGACTTGATCATGTTGCTGTTAGTCTCCCAGGTGGGAGAATCCTGATATTTGGTGGATCTGTTGCAGGTCTCCACTCTGCTTCCCAACTTTACATTCTAGACCCAACCGAAGAGAAACCTACATGGAGAATCCTGAATGTACCTGGGCGGCCTCCTAGATTTGCTTGGGGACACAGCACATGTGTTGTGGGAGGGACAAGAGCTATTGTACTGGGTGGTCAAACAGGAGAGGAATGGATGCTAAGCGAGCTTCATGAGCTATCTCTGGCAAGTTCTGTAAATTAG 1836 0.476 MEWDSNSDLSGDDDETFAFNDNGGPLPFPVENLLQTTPCGFVVTDALEPDHPIIYVNTVFEMVTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSGVIAEIRRCLDEGTEFQGELLNFRKDGSPLMNRLRLTPIFGDDETITHVIGIQFFTEANIDLGPVLGPSLKESAKSSDQFRSVLSALSPLSVGDRNVTRGLCGILQLSDEVLSLKILARLTPRDIASVGSVCRRFYEVTKNENLWRMVCQNAWGSETTRVLETVPGARRLGWVRLARELTTLEAAAWRKVTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSKNPEWQHVQVSSPPPGRWGHTISCVNGSNLVVFGGCGRQGLLNDVFVLDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVAWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPGWRCVTGSGMPGAGNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTEEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASSVN 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1340 611 Pfam F-box-like 207 245 IPR001810 GO:0005515
Mibi09g1340 611 FunFam Adagio protein 1 196 243 - -
Mibi09g1340 611 SUPERFAMILY Galactose oxidase, central domain 282 596 IPR011043 -
Mibi09g1340 611 FunFam Putative LOV domain-containing protein 272 476 - -
Mibi09g1340 611 ProSiteProfiles SRCR domain profile. 213 256 IPR001190 GO:0005044|GO:0016020
Mibi09g1340 611 Gene3D - 478 609 IPR015915 GO:0005515
Mibi09g1340 611 SUPERFAMILY F-box domain 192 261 IPR036047 GO:0005515
Mibi09g1340 611 TIGRFAM sensory_box: PAS domain S-box protein 33 147 IPR000014 -
Mibi09g1340 611 Gene3D PAS domain 23 159 - -
Mibi09g1340 611 Gene3D - 273 477 IPR015915 GO:0005515
Mibi09g1340 611 Pfam Kelch motif 452 503 IPR011498 GO:0005515
Mibi09g1340 611 Pfam Kelch motif 519 566 IPR011498 GO:0005515
Mibi09g1340 611 ProSiteProfiles PAS repeat profile. 30 108 IPR000014 -
Mibi09g1340 611 MobiDBLite consensus disorder prediction 1 15 - -
Mibi09g1340 611 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 29 608 - -
Mibi09g1340 611 FunFam Adagio protein 1 28 159 - -
Mibi09g1340 611 MobiDBLite consensus disorder prediction 1 21 - -
Mibi09g1340 611 FunFam Putative LOV domain-containing protein 477 610 - -
Mibi09g1340 611 Pfam Galactose oxidase, central domain 295 345 - -
Mibi09g1340 611 Gene3D - 196 243 - -
Mibi09g1340 611 SUPERFAMILY PYP-like sensor domain (PAS domain) 37 148 IPR035965 -
Mibi09g1340 611 CDD PAS 37 147 IPR000014 -
Mibi09g1340 611 Pfam Galactose oxidase, central domain 359 406 - -
Mibi09g1340 611 Pfam PAS domain 38 148 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1340 Mibi-ChrMibi09 30185847 30192029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1340 34 149 AGC Kinase Gene Family AT5G58140 32.759 2.97e-14 74.3