Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1338 ATGACCAATTGTTTTATCCTATTTGAACTCGTGATAGATTATCACAGGGTCTTTGAACTAGCGCACTTAGCGGGGATACAGAGAGCAAAGATGGCTAAAGGTTTGAAGAAAAGCAACTATGAAGTGCTGGGAATGTGTTGTAGTTCAGAGGTGGCTCTGATTGAAAAGATTCTGAGGGGTCTTCATGGAGTCAAGGAGATTTCAGTCATTTTCCCAACCCGAACAGTCACTGTAACCCATGATCTTGATCTAATCTCTGAGTCACAAATCACTAATGCACTGAACATGGCGAGGCTTGAAGCCAGTTTGAAACCAGAAGGAGAGACTAAGCATGAAACAAAATGGCCAACACCAAGTACTTTGGCTTGTGGCTTGTTACTTGCACTTTCCTTTTTGAAGTATGTTTATCAACCTTTGGAATACTTGGCTATTGGTGCTGTTGTAATTGGCTCCCCTAGAATTCTATTACGAGGCTTAGCTTCCATCAGGAATCTCTCTCTTGATATCAACATTCTGGTTCTATTGGCAGTGTTTGGTACACTAGCTTTGGGAGATTTTTGGGAAGCTGGAATCATCACCTTCCTATTCTCCATTGCTCAATGGCTAGAGACAGTAGCAAGTTACAAGGCTATGGTCACCATGTCCTGTTTAACAAACATAGCTCCTCAAAGGGCCATTATTGCTGAGACAGGGGAACAAGTTGATGTCAATGAAGTTAAGATCAACACTGTCCTTGCAGTCAAGGCTGGTGATGCTATTCCTCTTGATGGTATTGTGGTTGAAGGGAAATGTGAAGTGGACGAAAAAATGTTGACAGGAGAGTCATTTCCTGTCACCAAAGAGTTAGGTTCAACTGTTTGGGCAGGCACTATTAATCTAAATGGTTATATCAGTGTGAAAACAACTGCATTGGCAACAGACACAGCAGTGGCAAGAATGACAAAGCTTGTTCAAGAGGCTCATGGCAGAAAATCCAGAGCTCAAAGATTTATAGATACCTGTGCAAAGTACTATGTACCTGGGGTTTTCTTGATATCAGTTGGTGTTGCTGTGATTCCCATAGCATTAAGGGTTCCCAACATTAAGTACTGGTGTCACATGGCTATTGTGGTTTTAGTAAGTGCATGCCCTTGTGCTCTTATCCTCTCCACACCTGTTACAATCTTCTGTGCCCTCACAAAAGCTGCCACAAGTGGGTTACTTCTCAAAGGTGGAGATTATGTAGAAGCACTCGCTGGTATCAAGATTTTGGCTTTCGATAAGACAGGCACATTAACTAAAGGAGAGTTCACTGTCACAGATTTTTCTGCTCTTGTAGATGATATTAGCATTCAACAGTTACTTTACTGGGTTACTAGTATTGAGAGTAAATCAAGTCACCCTATGGCGGCTGCACTTTTGGAATATGGAAGGCTACATGGTATCAAACCAATCCCTGAAAATGTGGAAGATTTTCAGAATTTTCCAGGGGAAGGAGTTTACGGTGAAATCGATGGGAAAGATGTCTATATTGGCAACAGGAAAATATGTGAGAGAGCTGGCTGTGAAAGTGAGTTTCTAAGCAAAGAAGAAAGAAATGGTTATGTATGCTGTGGAGCAAATATAGTTGGAGTGTTCAGCCTATCAGATACATGTAGATATGGAGCTTTAGAGGCAATAGAAGAGCTTAAGTCATTAGGTGTGAAATCAGCAATGCTGACAGGAGATAGCACTCATGCTGCTACACTTGTTCGGACTCAGCTGAACCATGCTCTAGACGTAGTTCATGCAGAGCTTCTACCACATGAAAAGGCAGTGATCATAGAGAATTTCAAGAAAGAAGGGCTTACAGCCATGATTGGAGACGGTATAAACGACGCTCCAGCTTTGGCCACAGCTGATGTGGGCATCTCAATGGGAATCTCAGGTTCAGCTCTCGCAGTAGAGACAGGCCACACAATTCTCATGTCAAACGACATTAGGAAGATACCAGAAGCCATTCATCTAGCAAGAAGAACTTTCAGAAAGCTAGTTCAAAATGTCATTTTCTCCATTGTCACAAAGGGTTTGATCCTAGCTTTGGCACTAGCAGGATACCCACTGGTTTGGCTTGCCGTTTTGACTGATGTTGGCACATGCTTGCTAGTGATTCTCAACAGCATGTTACTTCTAAACGAGAAAAAACACAAGAAGAATAAAAAAGCACCCAAAAAAACCAAATATGGTTTGTTCAATGAGGATGATAAGAAGGAGCCATTACTTGAAAAGCAAAGTGAATGTAATGAAGGATGCTGCAGAAATGTCTCTTGTGAAGTGAGCATTCCTAGTGCTGCAACTGAATGTGAAAAAGCTTGTTGTACAGATTCTGGGTCTACGAGTATGAGCTTGCTGGAGGAGTCTTCATGCAGAAAGAAGAGTACTTGTAGCTCTGATTGTTGCCAGTTGCAGAGCACAGAAGTGAAGGTTGATAATAATACAGAGAAATGTGGGAATCAACAATGCTGCAAAGAATATAGGAAGATTTGCTGCGTTGATCGAGATAACATGCCAGAAATTGTTATTGAGTGA 2547 0.4177 MTNCFILFELVIDYHRVFELAHLAGIQRAKMAKGLKKSNYEVLGMCCSSEVALIEKILRGLHGVKEISVIFPTRTVTVTHDLDLISESQITNALNMARLEASLKPEGETKHETKWPTPSTLACGLLLALSFLKYVYQPLEYLAIGAVVIGSPRILLRGLASIRNLSLDINILVLLAVFGTLALGDFWEAGIITFLFSIAQWLETVASYKAMVTMSCLTNIAPQRAIIAETGEQVDVNEVKINTVLAVKAGDAIPLDGIVVEGKCEVDEKMLTGESFPVTKELGSTVWAGTINLNGYISVKTTALATDTAVARMTKLVQEAHGRKSRAQRFIDTCAKYYVPGVFLISVGVAVIPIALRVPNIKYWCHMAIVVLVSACPCALILSTPVTIFCALTKAATSGLLLKGGDYVEALAGIKILAFDKTGTLTKGEFTVTDFSALVDDISIQQLLYWVTSIESKSSHPMAAALLEYGRLHGIKPIPENVEDFQNFPGEGVYGEIDGKDVYIGNRKICERAGCESEFLSKEERNGYVCCGANIVGVFSLSDTCRYGALEAIEELKSLGVKSAMLTGDSTHAATLVRTQLNHALDVVHAELLPHEKAVIIENFKKEGLTAMIGDGINDAPALATADVGISMGISGSALAVETGHTILMSNDIRKIPEAIHLARRTFRKLVQNVIFSIVTKGLILALALAGYPLVWLAVLTDVGTCLLVILNSMLLLNEKKHKKNKKAPKKTKYGLFNEDDKKEPLLEKQSECNEGCCRNVSCEVSIPSAATECEKACCTDSGSTSMSLLEESSCRKKSTCSSDCCQLQSTEVKVDNNTEKCGNQQCCKEYRKICCVDRDNMPEIVIE 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1338 848 FunFam Copper-transporting ATPase 1, putative 207 321 - -
Mibi09g1338 848 SFLD Haloacid Dehalogenase 401 666 - -
Mibi09g1338 848 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 169 716 IPR027256 GO:0006812|GO:0016020|GO:0019829
Mibi09g1338 848 SFLD p-type atpase 401 666 IPR044492 -
Mibi09g1338 848 CDD P-type_ATPase_HM 119 715 - -
Mibi09g1338 848 Gene3D - 32 104 - -
Mibi09g1338 848 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 169 717 - -
Mibi09g1338 848 ProSitePatterns E1-E2 ATPases phosphorylation site. 420 426 IPR018303 -
Mibi09g1338 848 FunFam Putative cadmium/zinc-transporting ATPase 3 429 545 - -
Mibi09g1338 848 SUPERFAMILY HMA, heavy metal-associated domain 33 105 IPR036163 GO:0046872
Mibi09g1338 848 Pfam haloacid dehalogenase-like hydrolase 414 627 - -
Mibi09g1338 848 SUPERFAMILY Calcium ATPase, transmembrane domain M 169 722 IPR023298 -
Mibi09g1338 848 ProSiteProfiles Heavy-metal-associated domain profile. 37 103 IPR006121 GO:0046872
Mibi09g1338 848 PRINTS P-type cation-transporting ATPase superfamily signature 418 432 - -
Mibi09g1338 848 PRINTS P-type cation-transporting ATPase superfamily signature 613 632 - -
Mibi09g1338 848 PRINTS P-type cation-transporting ATPase superfamily signature 267 281 - -
Mibi09g1338 848 PRINTS P-type cation-transporting ATPase superfamily signature 559 569 - -
Mibi09g1338 848 ProSitePatterns Hypothetical cof family signature 2. 613 635 - -
Mibi09g1338 848 SUPERFAMILY HAD-like 417 714 IPR036412 -
Mibi09g1338 848 CDD HMA 40 102 IPR006121 GO:0046872
Mibi09g1338 848 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 192 692 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi09g1338 848 FunFam Putative cadmium/zinc-transporting ATPase 3 32 104 - -
Mibi09g1338 848 Pfam Heavy-metal-associated domain 42 90 IPR006121 GO:0046872
Mibi09g1338 848 Pfam E1-E2 ATPase 228 396 - -
Mibi09g1338 848 Gene3D - 409 664 IPR023214 -
Mibi09g1338 848 PRINTS H+-transporting ATPase (proton pump) signature 645 670 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi09g1338 848 PRINTS H+-transporting ATPase (proton pump) signature 613 629 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi09g1338 848 SUPERFAMILY Calcium ATPase, transduction domain A 231 317 IPR008250 -
Mibi09g1338 848 Gene3D - 429 545 IPR023299 GO:0000166
Mibi09g1338 848 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 32 720 - -
Mibi09g1338 848 Gene3D - 207 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1338 Mibi-ChrMibi09 30170291 30176788 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1338 32 844 Primary Pumps ATPases AT4G30110 54.276 0.0 885