Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1335 ATGAAGTATATTCGGAGCAACAGCTTCAAACGTCTCTTCTCCTTCAAAAGACGCAGTTTTGGGGAACAAGTTTTGAGCCCTGAAAACAAAGAAACTCCTGAAAGACCCATTTGGAAATGCTTCTCATATCAAGAACTCTTCGATGCTACTAATGGCTTCTGCTATGATAATATGGTTGGAAAAGGAGGGTATTCAGAGGTTTATAAGGGAAAATTAGAAGATAAAGAGGAAATAGCAGTGAAGAGGCTCACAAAAAGCTGTAATGATGAGAGGAAAGAGAAGGAATTTCTCACAGAAATTGGAACAATTGGTCATGTTTGTCATTCAAATGTTTTACCTCTTCTTGGTTGCTGTATTGACAATGGCCTTTATCTTGTCTTTGAGTTTTCCTCAAGAGGATCCGTTGCTTCTCTTCTTCATGATGAGAATAAGCCTGTAATGGAATGGAAAATGAGGCATAAGATTGCCCTCGGAACTGCACGTGGCCTCCATTACTTGCACAAAGGTTGCCAAAGAAGGATACTCCATAGAGACATTAAGTCATCCAATGTTCTTTTGACTTCAGATTTTGAACCACAGATATCTGATTTTGGACTGGCCAAATGGCTTCCTTCTCAGTGGACTCACCATTCCATTGCCCCAATTGAAGGCACATTTGGGCACTTGGCTCCTGAGTACTATTTGCATGGAATTGTGGATGAGAAAACTGATGTATTTGCATTTGGGGTGTTTCTATTAGAACTCATCTCTGGGAAGAAACCCGTGCATGGATCAAACCAGAGTTTACACAATTGGGCTAGGCCAATATTGAAGAGAGGAGAGCTAGAGAAAGTGGTAGATCCAAGGCTTGAAGGAGCTTATGATGTTCCAGAGTTAACAAAGCTTTCTTTTGCAGCTTCTCTCTGTATCCGACCATCTTCAACTTATAGACCCACCATGCCTCAGGTATTGGGGTTAATGGAGGAGGGAGAAATAGACAAAGATAAATGGAAAATGTCAGAAGAGGAGGAAGAGAGAGAAGAGGACGTGGTATGGGGTTTTGAGGATTTGGAATATGAATATGATAGTGTTTCTTCAATGTCTCTCCCTGACTCCATTACAGGTAATTTAGATGTAAATCTTGTTTTGGTATGA 1134 0.4065 MKYIRSNSFKRLFSFKRRSFGEQVLSPENKETPERPIWKCFSYQELFDATNGFCYDNMVGKGGYSEVYKGKLEDKEEIAVKRLTKSCNDERKEKEFLTEIGTIGHVCHSNVLPLLGCCIDNGLYLVFEFSSRGSVASLLHDENKPVMEWKMRHKIALGTARGLHYLHKGCQRRILHRDIKSSNVLLTSDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGIVDEKTDVFAFGVFLLELISGKKPVHGSNQSLHNWARPILKRGELEKVVDPRLEGAYDVPELTKLSFAASLCIRPSSTYRPTMPQVLGLMEEGEIDKDKWKMSEEEEEREEDVVWGFEDLEYEYDSVSSMSLPDSITGNLDVNLVLV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1335 377 Gene3D Phosphorylase Kinase; domain 1 19 129 - -
Mibi09g1335 377 Gene3D Transferase(Phosphotransferase) domain 1 131 346 - -
Mibi09g1335 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Mibi09g1335 377 FunFam Putative receptor-like serine/threonine-protein kinase 131 345 - -
Mibi09g1335 377 SMART serkin_6 53 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1335 377 PANTHER OS08G0249100 PROTEIN 26 350 - -
Mibi09g1335 377 SUPERFAMILY Protein kinase-like (PK-like) 32 319 IPR011009 -
Mibi09g1335 377 FunFam Putative receptor-like serine/threonine-protein kinase 21 129 - -
Mibi09g1335 377 Pfam Protein kinase domain 57 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1335 377 ProSiteProfiles Protein kinase domain profile. 53 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1335 377 ProSitePatterns Protein kinases ATP-binding region signature. 59 81 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1335 Mibi-ChrMibi09 30136777 30141066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1335 41 325 Trihelix Transcription Factor Family AT1G70460 43.390 2.02e-70 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mibi09g1335 Pkinase 4.4e-41 CL0016