Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1314 ATGGTAAAGCAAATAGAAACTCCATGCGATGAAGAATTATTCATTTTCCATTCCAAACTACCAAACATCCCCATCCCAACCCACCTCCCCTTATACTCTTACTGCTTCCAGAATCTGTCCCAATTCAAACACCGTCCTTGCCTCATCAACAGCAAAACCAACCACACATTCACATACTCCGACGTCGACCTCATCGCCCAAAAACTCTCCTCCGGCCTCAACAACCTCGGCCTCCAACAAGGCCATGTCATCATGCTCCTCCTCCTCAACTCCCCCGAATTCATCTTCTCCTTCCTCGGAGCCACCCGCCTCGGCCTCACCGTCACCACCGCCAACCCGTACTACACCGCCGCCGAGGTCACCAAGCAAGCCGCCACATCAAACACCAAGCTCATCATCACACACGTGTCCTTCCTCGATAAGGTCCAGGATTTCGCCATAGACAACAACGTTGCACTGGTGCTAGTCCACGACGAGGACGAGGACATACCGTGTAATTTCATAAGTTTCTCCCATTTAACGAAGGCGGAGGAGGAGGAGAGAATTAAGATCCCACCGGTGACGATATCGCCGGAGGACATCGCCGCCATGCCGTATTCCTCCGGCACCACCGGGCTTCCTAAGGGAGTGATGTTGACACATAAAGGTTTGGTGACAAATGTGGCTCAATTGGTTGATGGAGAGAACCCTAATTTGTATTTTCATGAAGAGGATGTGATTGCATGTGTTTGTCCACTTTTTCATAGTTATGCGTTGTTTACTATCGTGTTAAGTGGGATTCGAACCGGTGCAGCCATTCTGGTGATTCCCAAGTTTGAGGTAGTGACTATGTTGGAGTTGGTTGAGAAATACAGAGTGACAGTTGCGCCGTTTGTGCCACCTATTCTGTGGAACATTATTAATGCGACCAACCTGCTGCAACGGTACGACGTGTCGTCTATTAGGATGATCATGTGTGCAGCTGCTCCGTTAAGGAAAGAGCTTGAAGATGCTGTGAGGGATAAGCTTCCTAATGCCACTCTTGCACAGGCGTATGGGATGACGGAGGCTGGTCCAGCAGTGTCAATGAGCTTGGCGTTTGCGAAAGAGGCGCAGAAGGTGAAATCAGGTGGCTGCGGGACCATACTAAGGAACTCTGAGGTGAAGATCGTTGACCCTGACTCCGGCATCTCCCTTGGCCGGAATCAAGTCGGAGAGATTTGTGTTCGTGGCAATCAGATCATGAAAGGTTACATAAACGACCCAGAAGCAACAAAGAGTACAATAGATGAAAGAGGGTGGCTACACACAGGTGATATTGGATATGTGGACGAGGATGACGAACTGTTCATAGTGGATCGCTTGAAGGAAGTCATAAAATACAAAGGCTTTCAAGTGGCTCCTGCTGAACTTGAGGCTCTTCTCCTTTCTCATCCTTCCATTTCTGATGCTGCTCTTGTTCCGATGAAAGATGAGGTTGCAGGAGAGCTTCCTGTTGCATTTGTTGTCAAATCTGAAGGTTTCAACATCTCTGAGCATGAAATCATGGACTACATCTCACAAAAGGTTGTGTATTACAAGAGAATAAAGAAGGTCTTTTTCGTGGGCTCAATTCCAAGGAATGCCTCCGGCAAGATTCTGCGCAGAGACCTGAGAGCAAGGCTACCCAGCGAGTGA 1656 0.4867 MVKQIETPCDEELFIFHSKLPNIPIPTHLPLYSYCFQNLSQFKHRPCLINSKTNHTFTYSDVDLIAQKLSSGLNNLGLQQGHVIMLLLLNSPEFIFSFLGATRLGLTVTTANPYYTAAEVTKQAATSNTKLIITHVSFLDKVQDFAIDNNVALVLVHDEDEDIPCNFISFSHLTKAEEEERIKIPPVTISPEDIAAMPYSSGTTGLPKGVMLTHKGLVTNVAQLVDGENPNLYFHEEDVIACVCPLFHSYALFTIVLSGIRTGAAILVIPKFEVVTMLELVEKYRVTVAPFVPPILWNIINATNLLQRYDVSSIRMIMCAAAPLRKELEDAVRDKLPNATLAQAYGMTEAGPAVSMSLAFAKEAQKVKSGGCGTILRNSEVKIVDPDSGISLGRNQVGEICVRGNQIMKGYINDPEATKSTIDERGWLHTGDIGYVDEDDELFIVDRLKEVIKYKGFQVAPAELEALLLSHPSISDAALVPMKDEVAGELPVAFVVKSEGFNISEHEIMDYISQKVVYYKRIKKVFFVGSIPRNASGKILRRDLRARLPSE 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1314 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 546 - -
Mibi09g1314 551 SUPERFAMILY Acetyl-CoA synthetase-like 23 549 - -
Mibi09g1314 551 Gene3D - 450 549 IPR045851 -
Mibi09g1314 551 CDD 4CL 25 544 - -
Mibi09g1314 551 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 449 - -
Mibi09g1314 551 Pfam AMP-binding enzyme C-terminal domain 463 538 IPR025110 -
Mibi09g1314 551 FunFam 4-coumarate--CoA ligase 2 450 551 - -
Mibi09g1314 551 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
Mibi09g1314 551 Gene3D - 14 449 IPR042099 -
Mibi09g1314 551 Pfam AMP-binding enzyme 38 454 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1314 Mibi-ChrMibi09 29844490 29851120 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1314 15 516 Monolignol Biosynthesis Gene Families AT1G51680 60.040 0.0 610