Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1313 ATGGAAGAAACTCCACCATCAGAATTCATCTTCCGATCAAAACTCCCAGACATATACATCCCATCCCATCTCCCTCTTCACACCTACATCTTCCAAAACCTCTCCCACGTCAAAGACCGTCCCTGCCTCATCAACGGCGACACCGGCGCCACCCTCACCTACGGCGACGTCCACCTCACCGCCCGCCGCGTCGCCGCCGGCCTCGCCAACAAACTCAACATCCGACAAGGTGACGTCATCATGCTCGTCCTCCGAAACTGCCCCGAATTCGCCCTCGCCTTCCTCGGCGCCTCCCTCGCCGGCGCCGCCGTCACCACCGCCAACCCCTCCTTCACCGCCGCCGAGCTCGCCAAACAAGCCACCGCCTCCAACTCCAAACTCATCATAACCCAATCCACCTTCATCCACAAAATCAAAGACTTCTCCAACACACATAACATCCCACTCATCCGCATTGATGATGATTCTTCACAAAACCAAAGCATCCCACATTTTTCTATCCTCACACAATCCGATGAGGCCGATGTCCCCGCCGTAAAAATCTCCCCCGACGACGTCGTCGCGCTGCCGTACTCCTCCGGCACATCAGGCGTACCGAAAGGAGTCATGTTGACACATAAGAATCTTGTGACATCGGTGGCTCAGCTTGTGGATGGGGAGAATCCGAACCAGTACACTAAGGTTGATGACATACATATATGTGTGCTTCCGATGTTTCATATTTATGCGCTTAATTCTATATTGTTGTGTTCTATGCGTGCGGGAGCTGCTGTTCTTACGATGAGTAAGTATGATGTGACGACTTTGTTGAGGATGGTGGAGAGCTATAAGGTGACTATGGCGTCGTTTGTGCCTCCTATATTGTTGAGTATTGTGAAGAGTGAGGAGGTTGATCGGTATGACTTGTCGTCCATTCGGGTTATCGTCACCGGAGCGGCGCCGGTTAGCGTGGAGCTGGAACAAGCGCTTAGAGCCAAGCTTCCACACGCCGTACTTGGACAGGGGTATGGGATGACGGAGGGTGGTCCTTTGTCGATAAGCCTATCATTTGCAAAGGAGCCGGTGGAGATGAAATCAGGTGCTTGCGGGAGCGTCATAAGAAATGCAGAGATGAAGATCCTCGACATTCAAACCGGAGCCTCTCTTCCAAGAAACACACCTGGTGAAATCTGCATCAGAGGCAATGAAGTCATGAAAGGGTACCTAAACGACGTGGAGGCGACAAAAACGACGATAGACGAAGAAGGATGGCTACACACAGGAGACATAGGATATGTAGACGACGACGATCAAGTGTTCGTTGTGGATCGTTTGAAAGAGATAATAAAATACAAAGGCTTCCAAGTGGCTCCAGCTGAACTAGAGTCTCTCCTCATCTCTCACCCTCTAATCTCTGATGCTGCTGTTGTTCCGATGAAAGATGAAGGTGCGGGAGAGCTTCCAGTGGCATTCGTGGTTAGGTCAAACGGTTCAAAGATCTCTGAGGATGACATTAAACACTTCATTTCACAACAGGTGGTGTACTACAAGAGAATCCATAAGGTTATTTTCACAGACACTATTCCTAAGGCAGCCTCTGGCAAAATTTTAAGAAAGGATTTAAAAGCAAGGCTTGCATCAGATTTGGGCAATTAA 1635 0.5009 MEETPPSEFIFRSKLPDIYIPSHLPLHTYIFQNLSHVKDRPCLINGDTGATLTYGDVHLTARRVAAGLANKLNIRQGDVIMLVLRNCPEFALAFLGASLAGAAVTTANPSFTAAELAKQATASNSKLIITQSTFIHKIKDFSNTHNIPLIRIDDDSSQNQSIPHFSILTQSDEADVPAVKISPDDVVALPYSSGTSGVPKGVMLTHKNLVTSVAQLVDGENPNQYTKVDDIHICVLPMFHIYALNSILLCSMRAGAAVLTMSKYDVTTLLRMVESYKVTMASFVPPILLSIVKSEEVDRYDLSSIRVIVTGAAPVSVELEQALRAKLPHAVLGQGYGMTEGGPLSISLSFAKEPVEMKSGACGSVIRNAEMKILDIQTGASLPRNTPGEICIRGNEVMKGYLNDVEATKTTIDEEGWLHTGDIGYVDDDDQVFVVDRLKEIIKYKGFQVAPAELESLLISHPLISDAAVVPMKDEGAGELPVAFVVRSNGSKISEDDIKHFISQQVVYYKRIHKVIFTDTIPKAASGKILRKDLKARLASDLGN 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1313 544 FunFam Long-chain-fatty-acid--CoA ligase FadD 12 439 - -
Mibi09g1313 544 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Mibi09g1313 544 CDD 4CL 20 534 - -
Mibi09g1313 544 ProSitePatterns Putative AMP-binding domain signature. 189 200 IPR020845 -
Mibi09g1313 544 FunFam 4-coumarate--CoA ligase 2 440 541 - -
Mibi09g1313 544 Gene3D - 439 541 IPR045851 -
Mibi09g1313 544 SUPERFAMILY Acetyl-CoA synthetase-like 20 540 - -
Mibi09g1313 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 536 - -
Mibi09g1313 544 Pfam AMP-binding enzyme 35 444 IPR000873 -
Mibi09g1313 544 Gene3D - 3 438 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1313 Mibi-ChrMibi09 29832020 29840581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1313 7 506 Monolignol Biosynthesis Gene Families AT1G51680 63.333 0.0 638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1313 09 29832020 29840581 Mibi09g1313 09 29832020 29840581 ECH