Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1304 ATGGGGTTTGCAAGCAGTGTTGGAAAGTACAGTCTTGGCCGTACGATTGGAGAAGGAACATTTGCTAAGGTTAAACTTGCTGTTAACAGCCTCAATGGTCAACAAGTGGCTATAAAGATCCTTGATAAGAAAATGGTCATGGAGAGCCATCTCAAGTATCAGGTCAAAAGAGAGATAGGAACAATGAAGCTCCTGAACCATCCCAATATTGTAAAAATCCATGAGGTTATTGGCACGAAGACGAAGATATATATTGTGATGGAGTATGTATCAGGAGGACAGTTATCAGATAAGCTGTCTTATGCCATAAAGTTGAACGAAATTGAAGGTAGGAAACTTTTCCAGCAACTTATTGATGCTGTAGATTACTGCCATAACAAAGGAGTTTACCATAGAGATCTTAAGCCAGCAAACTTGCTTCTCGACAGCAAAGGGAATCTCAAGCTTTCTGATTTTGGGCTAAGTGCACTGAGAAAGCCTGATAATGTTCTGACAACTGCATGCGGTTCCCCAAGCTATGTGGCACCTGAGCTTCTATGGAACAAGGGCTACGATGGAGCAGCTGCTGATGTTTGGTCATGTGGAGTGATCCTTTTTGAATTACTTGCAGGTCATCTTCCTTTTAATGACCACAACTTGATGAACTTGTATAAGAAGATATGTAGAGCAGAGTACACGTGTCCACCATGGTTTACAGTAAGTCAGAGGAAACTAATTGGCAAAATACTTGAACCACGAGTTACAAAGAGAATGACTATTCCAGAGATAATGGAAGATGAATGGTTTCAAACAGATTATGTGCCTGCTAGTGAATCTGAGTGTGATCATAACATTCACATGGATGATGTTTATGCTGCTTTTGATTCAACTGAGGAGAATATCTTAGAGGCAACAATCCCCAAATCCTCAAGTTTCATTAATGCTTTCCAACTTATAGCCATGTCTCAGGATCTTGATCTATCAGGGCTTTTTGAAGAACAGGATCACAAGCAGAAAACAAGAATAGGATCAAAGCACAACATTGATGAAACCATAGAGAAAATAGAAACTGCTGCAACAGATGTGAAGCTGTCCATAGAAAAAAAGAACAACTTCACGTTAAAAATGCAACCCAAACGAACAATTATGACTAGATGTTCCAGATCATATTATGACCTATCAGCTAAGGTGATTGAAGTTGCTCCAGATCATTGTGTTGTTGAAGTGTCCAAATCTGCCGGAGATTTAGTAATCTACAAAGAATTTTGTGAAAGTCTATCCAATCTACTGACAGAAAAATCTGTTGCATTATCCCAATCCGACGAGTCTATCGAAGAATGCATCACGGAAAAGAATGACCAAGATGCTGGCAGGCAATGA 1359 0.3966 MGFASSVGKYSLGRTIGEGTFAKVKLAVNSLNGQQVAIKILDKKMVMESHLKYQVKREIGTMKLLNHPNIVKIHEVIGTKTKIYIVMEYVSGGQLSDKLSYAIKLNEIEGRKLFQQLIDAVDYCHNKGVYHRDLKPANLLLDSKGNLKLSDFGLSALRKPDNVLTTACGSPSYVAPELLWNKGYDGAAADVWSCGVILFELLAGHLPFNDHNLMNLYKKICRAEYTCPPWFTVSQRKLIGKILEPRVTKRMTIPEIMEDEWFQTDYVPASESECDHNIHMDDVYAAFDSTEENILEATIPKSSSFINAFQLIAMSQDLDLSGLFEEQDHKQKTRIGSKHNIDETIEKIETAATDVKLSIEKKNNFTLKMQPKRTIMTRCSRSYYDLSAKVIEVAPDHCVVEVSKSAGDLVIYKEFCESLSNLLTEKSVALSQSDESIEECITEKNDQDAGRQ 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1304 452 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Mibi09g1304 452 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1304 452 FunFam Non-specific serine/threonine protein kinase 2 89 - -
Mibi09g1304 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Mibi09g1304 452 SUPERFAMILY Protein kinase-like (PK-like) 8 310 IPR011009 -
Mibi09g1304 452 Gene3D Transferase(Phosphotransferase) domain 1 95 286 - -
Mibi09g1304 452 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 408 - -
Mibi09g1304 452 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Mibi09g1304 452 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1304 452 FunFam Non-specific serine/threonine protein kinase 301 428 - -
Mibi09g1304 452 FunFam Non-specific serine/threonine protein kinase 4 302 - -
Mibi09g1304 452 Pfam NAF domain 304 361 IPR004041 GO:0007165
Mibi09g1304 452 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Mibi09g1304 452 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1304 452 CDD CIPK_C 307 420 - -
Mibi09g1304 452 Gene3D Kinase associated domain 1, KA1 301 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1304 Mibi-ChrMibi09 29638361 29641484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1304 5 419 CBL-interacting serine-threonine protein kinases AT1G01140 49.524 8.88e-148 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi09g1304 Pkinase 3.6e-71 CL0016