Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1296 ATGGGATCCAACCTGAGTTGCTGTGGTACAGACAAGGTGGAAGAAGTGCCAGGATCAGGTAGTGTGGCGAACAATAGTAATAATTCATGGAGAATATTCACATACAAGGAATTGCATGCTGCCACAAATGGTTTCAGTGAGGATTGTAAACTTGGTGAAGGTGGCTTTGGAAGTGTCTACTGGGGAAAAACCTCTGATGGCCTTCAGATAGCAGTGAAGAAACTGAAAGCAATGAACTCAAAGGCAGAGATGGAATTCGCAGTGGAAGTAGAAGTTCTGGGGAGAGTGAGGCACAAGAACTTGTTGGGGCTAAGAGGTTACTGCGCAGGAGACGAACAAAGACTGATAGTCTATGATTACATGCCAAATCTGAGTCTTCTCTCTCACCTCCATGGCCAGTTCGCTAACGAAGTCCAGCTCGACTGGAAAAGAAGAATGAACATCGCCATTGGCTCTGCTCAAGGCTTATTGTACTTGCATCACGAGGTTACACCTCATATAATCCACAGAGATATAAAGGCAAGCAATGTTCTACTAAACTCAGACTTCGAGCCATTAGTTGCTGATTTTGGATTTGCGAAGCTGATCCCAGAAGGGGTAAGCCACCTAACAACACGTGTGAAGGGCACATTAGGGTACTTAGCCCCAGAATATGCCATGTGGGGTAAGGTCTCTGAAAGTTGCGATGTGTATAGCTTTGGGATTCTTCTGTTAGAACTAGTCACAGGAAGGAAGCCCATAGAGAAGCTACCAGGAGGGTTAAAGAGAACCATAACAGAATGGGCAGAACCATTCATAAGCAAAGGAAAGTTTAGGGAAATGGTGGATCGAAGACTTAGAGGGAATTTTGATGAGAGACAAGTTGAGCAAATGATAAATGTGGCTGCACTTTGTGTTCAAAGTGAGCCTGAGAAGAGACCAAATATGAAGCAAGTTGTTAATTTGTTGAAAGGGTATGAAGCAGATCATGGGAGGGTAATGAAGACTAGGATTGATAGTATTAAGTATAATGAACAGCTTTTGGAGCTTGATCAGAATAGTGATGATGATGAAGATGAAGATGATGAAACCATTAACGGTGGGTATGGTGTTTTTAGTGCTCTTGAGGTTCAAAAGATGCATGATCCTTATAAGCGTCATGGGGGTCAGGCAAAAGTGGCTAAGCAACCAATTTGA 1176 0.4328 MGSNLSCCGTDKVEEVPGSGSVANNSNNSWRIFTYKELHAATNGFSEDCKLGEGGFGSVYWGKTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGDEQRLIVYDYMPNLSLLSHLHGQFANEVQLDWKRRMNIAIGSAQGLLYLHHEVTPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGLKRTITEWAEPFISKGKFREMVDRRLRGNFDERQVEQMINVAALCVQSEPEKRPNMKQVVNLLKGYEADHGRVMKTRIDSIKYNEQLLELDQNSDDDEDEDDETINGGYGVFSALEVQKMHDPYKRHGGQAKVAKQPI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1296 391 Gene3D Phosphorylase Kinase; domain 1 19 120 - -
Mibi09g1296 391 Pfam Protein tyrosine and serine/threonine kinase 49 316 IPR001245 GO:0004672|GO:0006468
Mibi09g1296 391 PANTHER OS01G0253100 PROTEIN 26 320 IPR045271 -
Mibi09g1296 391 FunFam PTI1-like tyrosine-protein kinase At3g15890 19 120 - -
Mibi09g1296 391 ProSiteProfiles Protein kinase domain profile. 45 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1296 391 Gene3D Transferase(Phosphotransferase) domain 1 121 332 - -
Mibi09g1296 391 CDD STKc_IRAK 51 318 - -
Mibi09g1296 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Mibi09g1296 391 SMART serkin_6 45 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1296 391 SUPERFAMILY Protein kinase-like (PK-like) 25 324 IPR011009 -
Mibi09g1296 391 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Mibi09g1296 391 FunFam PTI1-like tyrosine-protein kinase At3g15890 121 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1296 Mibi-ChrMibi09 29429575 29432585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1296 33 364 Trihelix Transcription Factor Family AT1G70460 46.221 4.50e-97 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mibi09g1296 PK_Tyr_Ser-Thr 1.8e-44 CL0016