Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1281 ATGAAAGCGGTGTTGGTAATGGGGCTTGCCATCTTGAGCCTTGTCTCACTGGCTTCTGCTATTCCTGGAACTGCCACCTTTTACACTGTTTATACGCCATCGGCATGCTATGGATTTCAAGACCAAGGGACTATGATTGCAGCAGCAAGTGATCCAATCTATAACAATGGAGCTGCATGTGGAAGAATGTACAGAGTTACATGCACCAGTGGCACTAACAGTGTTCCTAACGCGTGCCGGGGAGGAAGCGTCACCGTCAAAATCGTCGATCGTTGCCCTTCTCCTGGATGCCAAGCAACCTTAGATCTCTCTCAAGAAGCTTTCTCTATCATTGCTAACCCTGACGCAGGAAAAGTCAACATTGACTACGTCCAGGTCAACTGA 384 0.4818 MKAVLVMGLAILSLVSLASAIPGTATFYTVYTPSACYGFQDQGTMIAAASDPIYNNGAACGRMYRVTCTSGTNSVPNACRGGSVTVKIVDRCPSPGCQATLDLSQEAFSIIANPDAGKVNIDYVQVN 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1281 127 SUPERFAMILY Barwin-like endoglucanases 10 126 IPR036908 -
Mibi09g1281 127 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 23 127 IPR007112 -
Mibi09g1281 127 Pfam Lytic transglycolase 47 123 IPR009009 -
Mibi09g1281 127 Gene3D - 14 127 IPR036908 -
Mibi09g1281 127 FunFam Barwin-related endoglucanase 20 125 - -
Mibi09g1281 127 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 2 125 IPR044206 GO:0009627|GO:0048046
Mibi09g1281 127 SMART dpbb_1 46 123 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1281 Mibi-ChrMibi09 29121568 29124778 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1281 45 123 Expansin Gene Family AT2G45110 32.584 5.52e-08 47.8