Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1280 ATGAAAGCAATGTTCGTAATAATGCTTGCAATTATTGCAAGTATTGTTTCAGTGGCATCTGCTATTACTGGAACTTCCACCTTTTACACTCAATATCATCTGCATGCTATGGATTCCAAAACGATCAGGGAAGTATATATGATCGCCGCGGCGAGTGACTCGATCTGGGACAATGGAGCTGCATGTGGAAGAGAGTACATGATTAGCTGCACTAGTGGTACCAACTTAGGTGTGGCTCATCCTTGCCGTAGTGGAACCGTCACCGTCAAGATCGTCGATTACTGCCCTCCTCCAGCATGCAGAGGAACCTTTGATCTCTCCCTCGAAGCTTACTCTGCCATTGCTGACCCTAATGAAGGAAAAATCAATATTGAGTACACCCAGTAA 387 0.4522 MKAMFVIMLAIIASIVSVASAITGTSTFYTQYHLHAMDSKTIREVYMIAAASDSIWDNGAACGREYMISCTSGTNLGVAHPCRSGTVTVKIVDYCPPPACRGTFDLSLEAYSAIADPNEGKINIEYTQ 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1280 128 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 3 128 IPR044206 GO:0009627|GO:0048046
Mibi09g1280 128 Pfam Lytic transglycolase 49 126 IPR009009 -
Mibi09g1280 128 SUPERFAMILY Barwin-like endoglucanases 9 128 IPR036908 -
Mibi09g1280 128 Gene3D - 20 128 IPR036908 -
Mibi09g1280 128 SMART dpbb_1 48 126 IPR007112 -
Mibi09g1280 128 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 24 128 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1280 Mibi-ChrMibi09 29115003 29115509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1280 47 128 Expansin Gene Family AT2G45110 32.258 6.39e-07 45.1