Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1277 ATGGGAAGACTTCAAACTCTATTACAAGCTAAAATCGAGACCTTGAAGCCTCCTTCAGATCAACCACCACCATTCTATGTTCCTTCTTCTTCTTCTTCTTCACCACCCAATAATTTCAGATCTGATAATGGCTTCTTGAATTTAAACGACAAGGTAAGTCCAAGCATGCTACTTGTAATCATTATTCTTGCCATTGTCTTCTTCATTTCTGGGCTAATTCACCTCCTAGTTAGATTCCTATGGAGACCACAGCCCAGAGAATCAGAGGATTTATTAGAAAATGTCTCTGCTCTTCAAGGTCAATTACAACAACTCTTTCACCTTCATGATTCTGGGGTTGACCAATCCTTCATAGATAGCACCCTCCCTGTCTTCCATTACAAAGCCATCATAGGATTAAAAGACCCATTTGATTGTGCTGTGTGCTTATGTGAATTTGAATCTGATGATAAACTCAGATTATTACCCAAATGTAGCCATGCTTTTCACATGGAGTGTATTGATACTTGGCTCTTGTCTCATTCAACTTGCCCTCTTTGTAGAGCTAACTTGCTCTCTGATTTCTCTCCCAGAAACCCTTCTCCTTCTTCTTATTCTTCTCCTTTTGTCTTTGTTCTAGAATCTGGGAGTGATAGTTCCAGAGAGATTGTTCCAGAAAGAGAGAGTAATGGTAGGACTAGTTCTGTGATTGTAGATAATGAACTTGGGTTGACCCATTTAGATTTGTCACACAAATCTGTTGATTTGAGTTCAGATGATGCTAATAATTCTGAAGAGAAAGTGGTGACTGTGAAGTTGGGGAAGTTTAGGAATGTGGATCGTGTTGGTGAAGGAAGAAGAAGTAGTGAAGAAGAAATGGGAGGAGAAGCTAGGAGGTGTCTTTCAATGGGGTCATTTGCTTATGTTATGGATGAGAAATCTTCACTTCAAGTACCAGTAAGAGCTACAATGAAGAAGCAGACAAGTAAGAAAACTAAAGGTTTGCCTTTAACACCAGGAAGAAGGATTGCTATGTCAGAATGTGATTGCGAGTCCATGAGAGATTTCAAATTCACAGGTTTTGAAACAGTGAACGGTTTTGAGGGTTCATCTTCTGAAATTGCAAGTGTTATCGAAACAAGCAGGAAAGAGAGTTATTCTGTTTCAAAGATTTGGCTTAGAGGTAAGCAAGAGAAGCCACAGGCTATGGCTGATTCGTCAAGAAGGGCTGTTTCGTTTAGATTCTCAGGTCAGAGTAACGAAGTTGTGAGGGGTGATTTGAATGAAAAGAATGAAAAATCTGAGGTTGATGATGAAAACCAGAGCTGCTATAGTATGGATTCTCAGGGAAGAGCACCTTCTTTTGCAAGAAGAACACTGCTTTGGCTTACTGGAAAACAGAACAAGGTTGTTCATTCTTCCTCTGCTTCAAACTTGTAG 1419 0.3975 MGRLQTLLQAKIETLKPPSDQPPPFYVPSSSSSSPPNNFRSDNGFLNLNDKVSPSMLLVIIILAIVFFISGLIHLLVRFLWRPQPRESEDLLENVSALQGQLQQLFHLHDSGVDQSFIDSTLPVFHYKAIIGLKDPFDCAVCLCEFESDDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRANLLSDFSPRNPSPSSYSSPFVFVLESGSDSSREIVPERESNGRTSSVIVDNELGLTHLDLSHKSVDLSSDDANNSEEKVVTVKLGKFRNVDRVGEGRRSSEEEMGGEARRCLSMGSFAYVMDEKSSLQVPVRATMKKQTSKKTKGLPLTPGRRIAMSECDCESMRDFKFTGFETVNGFEGSSSEIASVIETSRKESYSVSKIWLRGKQEKPQAMADSSRRAVSFRFSGQSNEVVRGDLNEKNEKSEVDDENQSCYSMDSQGRAPSFARRTLLWLTGKQNKVVHSSSASNL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1277 472 Pfam Ring finger domain 138 181 IPR001841 -
Mibi09g1277 472 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 49 385 - -
Mibi09g1277 472 SMART ring_2 139 180 IPR001841 -
Mibi09g1277 472 MobiDBLite consensus disorder prediction 420 444 - -
Mibi09g1277 472 SUPERFAMILY RING/U-box 122 192 - -
Mibi09g1277 472 ProSiteProfiles Zinc finger RING-type profile. 139 181 IPR001841 -
Mibi09g1277 472 CDD RING-H2_PA-TM-RING 138 181 - -
Mibi09g1277 472 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 187 IPR013083 -
Mibi09g1277 472 FunFam RING-H2 finger protein ATL46 100 186 - -
Mibi09g1277 472 MobiDBLite consensus disorder prediction 16 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1277 Mibi-ChrMibi09 29085422 29086840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1277 40 470 C3H Transcription Factor Family AT2G18650 49.438 1.97e-112 336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1277 09 29085422 29086840 Mibi09g1277 09 29085422 29086840 ECH