Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1255 ATGCCTTTCAATTCGGTTCTGGTTCCTCTTCCTCTTCTCTTCTTCCTCTCCTTTGCTGGACTTTGTTTCTCTTCAGAGCCTCGAAACCATGAAGTGGAGGCTTTGATGAGCATAAAAAGTGCTCTGACTGACCCTCATGGAGTTTTGAGCAACTGGGATGAGTATTCGGTGGACCCTTGTAGCTGGACTATGATTACATGTTCTGCTGATTCTCTTGTCATAGGCCTGGGAGCTCCTAGCCAATTTCTTTCTGGAACTCTATCAGGAGCAATTGCAAATCTGACAAATCTTCGACAAGTTTTACTGCAGAACAATAATATCTCTGGCAAAATCCCACCTCAGCTTGGTACTCTTTCTAAGCTCCAAACTCTTGACCTTTCCAATAACCGATTCTCTGGGGCCATTCCAGGGTCTCTGAGTCAGCTGAATAGTCTCCAGTACCTGAGGCTGAACAACAATAGTCTCTCTGGGCCATTTCCTGTGTCACTGTCCAAAATCCCACAGCTTTCTTTCTTAGACTTGTCTTATAACAGTCTTAGTGGACCATTACCCAAATCTCCAGCCAGAACATTCAACGTTGTTGGAAACCCCTTAATTTGTGGAAGCACTTCTACTGAAAGTTGCTATCGATCAGCTACCCTCACACCTGTTCCTTTCACTCTGACTTTGTCACAAGGAAATCACAAGTCCAAGAAGCTAGCAATTGCACTTGGGGTCAGTCTTGGCTTTGCTAGCATCATACTCCTGTTTTCTGGGATATTATGGTACAGGAAGAGACGGCAGAGCCAAGCCATTATGTTCAGCAATGATTGTCAGGAAGAGGGGATTGTTAGCTTGGGAAATCTCAAAAGTTTTACTTTTAGAGAGCTCCAGCATGTAACAGATAATTTCAGCTCCAGGAACATACTTGGAGCTGGAGGTTTTGGCAATGTCTATCGGGGGAGGCTTGGGGATGGGACAATGGTGGCAGTGAAAAGGCTGAAGGATGTAAGTGGAAGTGCTGGGGAATCGCAGTTTCAAACAGAACTGGAGATGATCAGCTTGGCAGTTCACCGTAATTTACTTCGGTTAATTGGATTTTGTGCTACTCCTAATGAAAAGCTTCTTGTTTACCCTTATATGTCTAATGGCAGTGTGGCTTACAGGCTCAGAGGCAAACCTTCTTTGGACTGGAATACTAGGAAGAGGATTGCCATTGGAGCTGCCAGAGGTCTGTTGTATCTTCATGAGCAATGTGACCCAAAAATAATTCACAGAGATGTAAAGGCTGCTAATGTACTTCTAGATGAGTATTTTGAGCCTATTGTTGGTGATTTTGGGCTTGCAAAGCTCCTTGACCATGCTGACTCTCATGTCACAACTGCTGTCCGTGGCACTGTTGGCCACATTGCGCCAGAATACCTGTCCACCGGCCAATCTTCGGAGAAAACTGATGTATATGGATTTGGCATTCTCTTGTTGGAGCTTATAACTGGAATGACAGCCCTTGAGTTTGGGAAAACAGTTAATCAAAAGGGCGCTATCCTAGAGTGGGTTAAGAAAATACAACATGAAAAGAAACTTGAAGTATTGGTGGACAAAGAGTTAGGTAGTCACTATGACTGGATAGAAGTGGGGGAGATGTTGCAAGTAGCTTTACTCTGCACTCAAAATTCGCCTGCCCAGCGCCCTAAGATGTCTGATGTGGTCCGGATGCTTGAAGGTGATGGGCTTGCCGAGAAATGGGCGGCATCACATAATCATGGCAGCCTTAGCATGAGCTCCTTTCACAGTAACAGTAGCAACAGCTCATCATCTTATCCTACCACTGCAGCATCAAATTCGAAACATGATCGTTATAACATGTTTGGCATGGCAGTGGATGATGACGATGGACATTCTTCGGATTCCTCTGCCATTGAACTCTCTGGTCCAAGATGA 1920 0.4484 MPFNSVLVPLPLLFFLSFAGLCFSSEPRNHEVEALMSIKSALTDPHGVLSNWDEYSVDPCSWTMITCSADSLVIGLGAPSQFLSGTLSGAIANLTNLRQVLLQNNNISGKIPPQLGTLSKLQTLDLSNNRFSGAIPGSLSQLNSLQYLRLNNNSLSGPFPVSLSKIPQLSFLDLSYNSLSGPLPKSPARTFNVVGNPLICGSTSTESCYRSATLTPVPFTLTLSQGNHKSKKLAIALGVSLGFASIILLFSGILWYRKRRQSQAIMFSNDCQEEGIVSLGNLKSFTFRELQHVTDNFSSRNILGAGGFGNVYRGRLGDGTMVAVKRLKDVSGSAGESQFQTELEMISLAVHRNLLRLIGFCATPNEKLLVYPYMSNGSVAYRLRGKPSLDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDEYFEPIVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVYGFGILLLELITGMTALEFGKTVNQKGAILEWVKKIQHEKKLEVLVDKELGSHYDWIEVGEMLQVALLCTQNSPAQRPKMSDVVRMLEGDGLAEKWAASHNHGSLSMSSFHSNSSNSSSSYPTTAASNSKHDRYNMFGMAVDDDDGHSSDSSAIELSGPR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1255 639 FunFam Somatic embryogenesis receptor kinase 1 266 373 - -
Mibi09g1255 639 PRINTS Leucine-rich repeat signature 166 179 - -
Mibi09g1255 639 PRINTS Leucine-rich repeat signature 121 134 - -
Mibi09g1255 639 SUPERFAMILY Protein kinase-like (PK-like) 279 567 IPR011009 -
Mibi09g1255 639 Gene3D Phosphorylase Kinase; domain 1 266 373 - -
Mibi09g1255 639 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Mibi09g1255 639 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 577 - -
Mibi09g1255 639 MobiDBLite consensus disorder prediction 586 639 - -
Mibi09g1255 639 FunFam Somatic embryogenesis receptor-like kinase 1 374 586 - -
Mibi09g1255 639 Gene3D Ribonuclease Inhibitor 28 210 IPR032675 -
Mibi09g1255 639 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Mibi09g1255 639 Gene3D Transferase(Phosphotransferase) domain 1 374 585 - -
Mibi09g1255 639 SMART serkin_6 297 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1255 639 Pfam Protein kinase domain 299 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1255 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Mibi09g1255 639 FunFam Putative LRR receptor-like serine/threonine-protein kinase 28 210 - -
Mibi09g1255 639 MobiDBLite consensus disorder prediction 615 629 - -
Mibi09g1255 639 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Mibi09g1255 639 ProSiteProfiles Protein kinase domain profile. 297 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1255 639 SUPERFAMILY L domain-like 28 193 - -
Mibi09g1255 639 MobiDBLite consensus disorder prediction 586 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1255 Mibi-ChrMibi09 28532536 28536654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1255 6 639 Receptor kinase-like Gene Family AT5G16000 62.712 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mibi09g1255 Pkinase 1.4e-41 CL0016