Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1254 ATGATGATGCCGGATTCATGTTTCATGGCGGATTTTTCAAATTGGGTGCAGTTTCATGATATTGATGATAACCATGTTGGAATTGATATCAATGGATTGGAATCTGTTAATGTTTCTTCTGCAGGATACTACGATGATCGAGATTTTGGCCTCGCAAAGCTATGGGACCATGGAAATGACCCTCAGACATCGCATGTAGCAGGAACTCCGGGCTACATAGACCCAGGAATTGTGCGGAGTGGAAAATCAGACACATATACTGATATATACTCATTTGGGGTGTTTCTGTTGGAGATTGCTTGCGGAAGAAAGCCGATTGAAACTCAAACTTCGCCAGAGAAAGTGATGCTGATAGAATGGGTTAAAGAGTGCTGGGAAAAAGGTGAGATTTGTGAAGCAATTGATAGGAGATTGGGTGATGAATATGAAGTGGATGAAGCAAAATTGGTGCTCACACTTGGGTTGCTTTGTTCACATCCTATTGCTTCAGCTAGGCCAACTATTTCCAGTATTGTGCAGTATTTAGATGGAGATTCTGAGGTTCCTCACAGCTTGTTGGATTTATTGAAGTTTAGAGATTTTGGTGGCCGGTCATCAGTTCAGGCATATTCTTCAGCATCCTCTGATTTCCCTACTGGTCTTACTTCTGTTGGCCCTATGACTTTTACAGAATCATTTGCCTCCTCCGGACGCTAA 696 0.4239 MMMPDSCFMADFSNWVQFHDIDDNHVGIDINGLESVNVSSAGYYDDRDFGLAKLWDHGNDPQTSHVAGTPGYIDPGIVRSGKSDTYTDIYSFGVFLLEIACGRKPIETQTSPEKVMLIEWVKECWEKGEICEAIDRRLGDEYEVDEAKLVLTLGLLCSHPIASARPTISSIVQYLDGDSEVPHSLLDLLKFRDFGGRSSVQAYSSASSDFPTGLTSVGPMTFTESFASSGR 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1254 231 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1254 231 SUPERFAMILY Protein kinase-like (PK-like) 48 185 IPR011009 -
Mibi09g1254 231 Pfam Protein kinase domain 48 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1254 231 Gene3D Transferase(Phosphotransferase) domain 1 36 187 - -
Mibi09g1254 231 SUPERFAMILY Concanavalin A-like lectins/glucanases 11 52 IPR013320 -
Mibi09g1254 231 PANTHER - 48 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1254 Mibi-ChrMibi09 28425352 28427480 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1254 48 231 Receptor kinase-like Gene Family AT1G70110 50.543 1.31e-61 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi09g1254 Pkinase 5.5e-11 CL0016