Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1252 ATGTCCATCGTTGTTTTCATGCTCTGTTTGTTCTTAAACACAGCAAACTCCGACAAGAAAACAAGTAGTGATGATGTCGGATTCATGTTTCATGGTGGATACTTCAAATTGGGAGCAGGTAATGATCAAGAGCTCAAAAATTCCAACATGTCCAGACAAGTAATTCATGCTGATGGTGGCTTAAGTGAAGCATGGCAAGCCTTTTACAATCTTCCACTTCAGTTCAAGAATAATTCCAATAATACTTCCTCCTCTTCTTCTTCTGTCTTTTCTTTCTCCACCACTTTCATCTTTGTGGTAATAGCCACTGATCCTGGATTTCACGGTCATGGTCTCGCCTTCGCTTTTTCTCCGACAAAATTTATTTCTGAAGCTCAGCCAACCAATTATCTTGGCCTCTTCAATGCTTCCTCCACTGGAAAAAGTACCAATCATATTGTGGCAATAGAACTTGACACTGACCAGGATTTTCAGTTTCGTGATATTGATAATAACCATGTTGGAATTGATATCAATGGGTTGGAATCTGTTAATGTTTCTACTGCAGGATACTACGATGATCGAGTTCGTTTAAGAAATCTTGAACTTGCAAGTGGAGAACCATTTCAGGTTTGGGTTGAATATAATAGTTCAGATTGGAAACTCTGTGTCACAATTCATCCAATAAATATTCCTAAACCTGAGATTCCTCTTGTCACACTGAAAAGAGATCTTTCTTCTTATTTCTTTGAGGATATGTATGTTGGATTCTCGTCCGCTAGTGGGTTAAATGCATCTCATTACATATTGGGTTGGAGTTTTAAGATGAATGGTCAAGCTGAGCAGATAAATCTTACCCGCCTTCCTGACATTCCTGGAATTGTAGATCCTAATAAAATAGGTGGAAGAGGGAAAGGGTACAAAAAAGTTTTGATAGCTGTATTATTATTTGTGGGTGTGGTTACCTTTCTATCACTGATTTATGGTATGATTATGATTTCAAGGAGGAGAAAATTCATTCAGGTTCTTGAAGATTGGCAAGTCTTGTACGGGCCTCATAGATTCACTTACAAGGACTTGTTCATTGCAACAAAAGGGTTTAGAGAGGGACAACTTCTTGGAAGAGGAGGTTTTGGAAGAGTTTACAAAGGGATGCTACCATTTTCCAATCTACAAGTCGCAGTGAAGAGGGTTTCTCATGATTCAAAACAAGGAATGAGAGAATTCGTAGCGGAAATCGCGACCATAGGCCGTCTCAGGCATCCAAACTTGGTAAGACTTCTTGGCTATTGCAGAAGGAAAAAAGAACTCTTTTTGGTTTATGACTTTATGCCCAATGGAAGCCTAGACAAGTTCCTTTATCGCCTTCCCAATAACAACATTCTCAGCTGGAAACAAAGATTCAAAATCATCAAAGATGTTGCATCAGCACTTTTATATCTTCACGAGCAATGGGTTCAAGTTGTTATCCACAGAGACATCAAGCCAGCCAATGTGCTTATTGACAATGACATGAATGCTCGACTCGGAGATTTCGGCCTTGCTAAGCTATGGGATCATGGAAATGATCCTCAAACATCTTATGTAGCAGGAACTCCGGGCTACATAGACCCAGGAATTGTGCAGAATGGAAAATCAAACACATGTACTGATATATATTCATTTGGGGTGTTTCTATTGGAGGTTGCTTGTGGAAGAAGGCCGATCGAAACTAAGGCCTCGCCAGAGAAAGTGTTGATGATAGAATGGGTTATAGAGTGCTGCGAAAAAGGAGAGATTTGTGAAGCAATTGATAGCAGATTGGGTGATGAATATGAAGTGGATGAAGCAGTATTGGTACTCACACTTGGGTTGCTTTGTTCACATCCTATTGCTTCAGATAGGCCAACTATTTCTAGTGTTGTGCAGTATTTAGATGGAGATTCTGAGGTTCCTCATAACTTGTTGGAATTAATCAAGTTTAGAAATTTTGGTGGCCGGTCATCAGTTAAAGCATATTCTTCAACATCCTCTAATTTCCCAACTGGTCATACTTCTATTGCTTCTATGACTTTTACAGAACCATTTGCCTCCACTGGACGCTAA 2064 0.3958 MSIVVFMLCLFLNTANSDKKTSSDDVGFMFHGGYFKLGAGNDQELKNSNMSRQVIHADGGLSEAWQAFYNLPLQFKNNSNNTSSSSSSVFSFSTTFIFVVIATDPGFHGHGLAFAFSPTKFISEAQPTNYLGLFNASSTGKSTNHIVAIELDTDQDFQFRDIDNNHVGIDINGLESVNVSTAGYYDDRVRLRNLELASGEPFQVWVEYNSSDWKLCVTIHPINIPKPEIPLVTLKRDLSSYFFEDMYVGFSSASGLNASHYILGWSFKMNGQAEQINLTRLPDIPGIVDPNKIGGRGKGYKKVLIAVLLFVGVVTFLSLIYGMIMISRRRKFIQVLEDWQVLYGPHRFTYKDLFIATKGFREGQLLGRGGFGRVYKGMLPFSNLQVAVKRVSHDSKQGMREFVAEIATIGRLRHPNLVRLLGYCRRKKELFLVYDFMPNGSLDKFLYRLPNNNILSWKQRFKIIKDVASALLYLHEQWVQVVIHRDIKPANVLIDNDMNARLGDFGLAKLWDHGNDPQTSYVAGTPGYIDPGIVQNGKSNTCTDIYSFGVFLLEVACGRRPIETKASPEKVLMIEWVIECCEKGEICEAIDSRLGDEYEVDEAVLVLTLGLLCSHPIASDRPTISSVVQYLDGDSEVPHNLLELIKFRNFGGRSSVKAYSSTSSNFPTGHTSIASMTFTEPFASTGR 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1252 687 SUPERFAMILY Concanavalin A-like lectins/glucanases 66 273 IPR013320 -
Mibi09g1252 687 Gene3D - 48 283 - -
Mibi09g1252 687 FunFam L-type lectin-domain containing receptor kinase S.4 437 643 - -
Mibi09g1252 687 Pfam Legume lectin domain 66 281 IPR001220 GO:0030246
Mibi09g1252 687 PANTHER - 52 635 - -
Mibi09g1252 687 ProSitePatterns Protein kinases ATP-binding region signature. 366 389 IPR017441 GO:0005524
Mibi09g1252 687 ProSiteProfiles Protein kinase domain profile. 360 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1252 687 Gene3D Phosphorylase Kinase; domain 1 345 436 - -
Mibi09g1252 687 Pfam Protein kinase domain 361 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1252 687 SMART serkin_6 360 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1252 687 Gene3D Transferase(Phosphotransferase) domain 1 437 644 - -
Mibi09g1252 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Mibi09g1252 687 SUPERFAMILY Protein kinase-like (PK-like) 342 645 IPR011009 -
Mibi09g1252 687 CDD lectin_legume_LecRK_Arcelin_ConA 98 271 IPR001220 GO:0030246
Mibi09g1252 687 CDD STKc_IRAK 366 633 - -
Mibi09g1252 687 FunFam Lectin-domain containing receptor kinase A4.3 345 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1252 Mibi-ChrMibi09 28381703 28383905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1252 66 687 Receptor kinase-like Gene Family AT4G29050 54.386 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi09g1252 Pkinase 2.5e-48 CL0016