Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1251 ATGTCCATCGTCATTTTCATGCTCTGTTTGTTCTTAAACACAGCAAACTCCGACAAGAACATAAGCAATGATGATGTCGAATTCATGTTTCATGGTGGATTCTTCAAATTGGGAGCAGGTAATGATCAAGAGCTCAAAAATTCCAACATGTCCAGACAAGTAATTCATGCTGATGGTGGCCTAAGTGAAGCATGGCAAGTCTTTTACAATCTTCCTCTTCAATTCAAGAATAACTCCAATAATACTTCTTCCTCTTCTGTCTTCTCTTTCTCCACCACTTTCATCTTTGTGGTAATATCCACAGATCCTGGATTTCACGGCCATGGTCTCACCTTCGCTTTTTCGCCAACTAAATTTATTTCTGAAGCTCAGCCAAACCAATATCTTGGCCTATTCAATGATTCTTCCAATGGAAAAAGTTCCAATCATATTGTGGCAATAGAACTTGACACTGACCAGGATTTTCAGTTTCGTGATATTGATGATAACCATGTTGGAATTGATATCAATGGGTTGGACTCTGTTAATGTTTCTTCTGCAGGATACTACAATGATCGAGGTCGTTTAAGAAATCTTGAACTAGCAAGTGGAGAACCATTTCAGGTTTGGATTGAATATAATAGTAAAGATCAGAAACTCTCTGTCACAATTCATCCAATTAATATTCCTAAACCAGAGATTCCTCTTGTCACAAGGAATAATCTTTCTTCTTATTTCATTGAGGATATGTATGTTGGATTCTCATCCGCTAGTGGGTTAAATGCATCTCATTACATATTGGGTTGGAGTTTTAAGATGAATGGTCAAGCTGAGCAGATAAATCTTACCCGCCTTCCTGACATTCCTGGAATTGTAGATCCTAATAAAATAGGTGGAAGAGGGAAAGGGTACAAAAAAGTTTTGATAGCTGTATTATTATTTGTGGGTTTGGTTACCTTTCTATCACTGATTTATGGTATGATTATGATTTCAAGGAGGAGAAAATTCATTCAAGTTCTTGAAGATTGGCAAGTCTTGTATGGGCCTCATAGATTCACTTACAAGGACTTGTTCATTGCAACAAAAGGGTTTAGAAAGGGACAACTTCTTGGGAAAGGAGGTTTTGGAAGAGTATACAAAGGGATGTTACCATTTTCCAATGTTCAAGTCGCGGTTAAAAGGATCTCTCATGATTCAAAACAAGGAATGAGAGAATTCATCGCGGAAATAGCAACTATCGGCCGTCTCAGGCATCCAAACTTGGTAAGACTTATTGGCTATTGCAGAAGGAAAAAAGAACTCTTTTTGGTTTATGACTTTATGCCCAATGGAAGCCTAGACAAGTTCCTTTATCACCTTCCCAATAACAACATTCTCAGCTGGAAACAAAGATTCAAAATCATCAAAGATGTTGCATCTGCACTCTTATATCTTCACCAGCAATGGGTCCAAGTTGTTATCCACAGAGACATCAAGCCAGCTAATGTGCTTATTGACAATGACATGAATGCTAGACTAGGAGATTTTGGCCTTGCTAAGCTATGGGACCATGGAAATGATCCTCAGACATCTCATGTAGCAGGAACTCCGGGCTACATAGACCCAAGAATTGTGCAGAGTGGAAAATCAGACACATGTGCTGATATATACTCATTTGGAGTGTTTCTGCTGGAGATTGCTTGTGGAAGAAAGCCGATTGAAACTCAAACTTTGCCGGAGAAAGTGATGATGATAGAATGGGTTACAGAGTGCTGGGAGAAAGGAGAGATTTGTGAAGCAATTGATAGTAAATTGGGTGATGAATATGAAGTGGATGAAGCAAAATTGGTGCTCACACTTGGGTTGATTTGTTCACATCATATTGCTTCAGCTAGGCCAACTATTTCTAGTATTGTGCAGTATTTAGATGGAGATTCTGAGATTCCTCATAACTTGTTGGATTTAATCAAGTTTAGAGATTTTGGTGGCCGGTCATCAGTTCAAGCATATTCTTCAGCATCCTCTGATTTCCCTACTGGTCATACCTCTATTGCTGCTATGACTTTTACAGAACCATTTGCCTCCTCTGGACGCTAA 2055 0.3888 MSIVIFMLCLFLNTANSDKNISNDDVEFMFHGGFFKLGAGNDQELKNSNMSRQVIHADGGLSEAWQVFYNLPLQFKNNSNNTSSSSVFSFSTTFIFVVISTDPGFHGHGLTFAFSPTKFISEAQPNQYLGLFNDSSNGKSSNHIVAIELDTDQDFQFRDIDDNHVGIDINGLDSVNVSSAGYYNDRGRLRNLELASGEPFQVWIEYNSKDQKLSVTIHPINIPKPEIPLVTRNNLSSYFIEDMYVGFSSASGLNASHYILGWSFKMNGQAEQINLTRLPDIPGIVDPNKIGGRGKGYKKVLIAVLLFVGLVTFLSLIYGMIMISRRRKFIQVLEDWQVLYGPHRFTYKDLFIATKGFRKGQLLGKGGFGRVYKGMLPFSNVQVAVKRISHDSKQGMREFIAEIATIGRLRHPNLVRLIGYCRRKKELFLVYDFMPNGSLDKFLYHLPNNNILSWKQRFKIIKDVASALLYLHQQWVQVVIHRDIKPANVLIDNDMNARLGDFGLAKLWDHGNDPQTSHVAGTPGYIDPRIVQSGKSDTCADIYSFGVFLLEIACGRKPIETQTLPEKVMMIEWVTECWEKGEICEAIDSKLGDEYEVDEAKLVLTLGLICSHHIASARPTISSIVQYLDGDSEIPHNLLDLIKFRDFGGRSSVQAYSSASSDFPTGHTSIAAMTFTEPFASSGR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1251 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 66 283 IPR013320 -
Mibi09g1251 684 SMART serkin_6 357 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1251 684 FunFam Lectin-domain containing receptor kinase A4.3 342 433 - -
Mibi09g1251 684 Gene3D Transferase(Phosphotransferase) domain 1 434 640 - -
Mibi09g1251 684 Pfam Protein kinase domain 358 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1251 684 Pfam Legume lectin domain 64 278 IPR001220 GO:0030246
Mibi09g1251 684 ProSiteProfiles Protein kinase domain profile. 357 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1251 684 PANTHER - 52 632 - -
Mibi09g1251 684 FunFam L-type lectin-domain containing receptor kinase S.4 434 640 - -
Mibi09g1251 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Mibi09g1251 684 Gene3D Phosphorylase Kinase; domain 1 342 433 - -
Mibi09g1251 684 Gene3D - 39 270 - -
Mibi09g1251 684 SUPERFAMILY Protein kinase-like (PK-like) 339 637 IPR011009 -
Mibi09g1251 684 CDD STKc_IRAK 363 630 - -
Mibi09g1251 684 ProSitePatterns Protein kinases ATP-binding region signature. 363 386 IPR017441 GO:0005524
Mibi09g1251 684 CDD lectin_legume_LecRK_Arcelin_ConA 96 268 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1251 Mibi-ChrMibi09 28373840 28376035 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1251 66 684 Receptor kinase-like Gene Family AT4G29050 54.080 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi09g1251 Pkinase 1.7e-49 CL0016