Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1250 ATGTCCATCATCATTTTCATGCTCTGTTTGTTCTTAAACACAGCAAACTCCGACAAGAACATAAGCAGTGATGATGTCGGATTCATGTTTCATGGTGGATTCTTCAAATTGGGAGCAGGTAATGATCAAGAGCTCAAAAATTCCAACATGTCCAGACAAGTAATTCATGCTGATGGTGGCCTAAGTGAAGCATGGCAAGTCTTTTACAATGTTCCTCTTCAATTCAAGAATAACTCCAGTAATACTTCCTCTTCTTCTTCTTCTGTCTTTTCTTTCTCCACCAATTTCATCTTTGTGGTAATACCCACTGATCCGAGATTTCACGGCCATGGTCTCGCCTTCGCTGTTTCGCCGACTAAATTTATTTCTGAAGCTCAGCCAAACCAATATCTTGGCCTATTCAATGCTTCCTCTAGCGGAAAAAGTTCCAATCATATTGTGGCAATAGAACTTGACACTGACCAGGATCCTCAGTTTCTTGATATTGATGATAACCATGTTGGAATTGATATCAATGGGTTGGAATCTGTTAATGTTTCTTCTGCAGGATACTACGATGATCGAGGTCGTTTAAGAAATCTTGAACTTGCAAGTGGAGAACCATTTCAGGTTTGGGTTGAATATAATAGTTCAGATCAGAAACTCTCTGTCACAATTCATCCAATAAATATTCCTAAACCAGAGATTCCTCTTGTCACACTGAATAATCTTTCTTCTTACTTCATTGAGGATATGTATGTTGGATTCTCGTCCGCCAGTGGGTTAAATGCATCTCATTACATATTGGGTTGGAGTTTTAAGATGAATGGTCAAGCTGAGCAGATAAATCTTACCCGCCTTCCTCACATTCCTGGAATTGTAGATCCTAATAAAATAGGTGGAAGAGGGATAGGGTACAAAAAAGTTTTGATGGCTATATTATCACTAGTAGGTGTGGTTACCTTTCTATTACTGATTTATGGTTTGATTATGATTTCAAGGAGGAGAAAATTCATTCAGGTTCTTGAAGATTGGCAAGTCTTGTATGGGCCTCATAGATTCACTTACAAGGACTTGTTCATTGCAACAAAAGGGTTTAGAGAGGGACAACTTCTTGGAAGAGGAGGTTTTGGAAGAGTATACAAAGGAATGCTTCCATTTTCTAATTTTCAAGTCGCGGTGAAGAGGATTTCTCATGATTCAAAACAAGGAATGAGAGAATTTGTCGCGGAAATAGCAACAATAGGCCGTCTTAGGCATCCAAACTTGGTAAGACTTCTTGGCTATTGCAGAAGACAAAAAGAACTCTTTTTGGTTTATGACTTTATGCCCAATGGAAGCCTAGACAAATTCCTTTATCACCTTCCCAATAACAGCATTCTCAGTTGGAAACAAAGATTCAAAATCATCAAAGATGTTGCATCTGCACTGTTATATCTTCACCAGCAATGGGTTCAAGTTGTCATCCACAGAGACATCAAGCCAGCTAATGTGCTTATTGACAATGACATGAATGCTAGACTAGGAGATTTCGGCCTCGCTAAGCTATGGGACCATGGTATTGATCCTCGGACATCTCGTGTAGCAGGAACTCCGGGCTACATAGACCCAAGAATTGTGCAGAGTGGAAAATCAAACACATGTACTGATATATACTCATTTGGGGTGTTTTTGCTCGAGATTGCTTGTGGAAGAAGGCCGATTGAAACTAAGACTTCGCCGGAGAAAGTGTTGATGATAGAATGGGTTACTGAGTGCTGGGAAAAAGGAGAGATTTGTGAAGCAATTGATAGTAGATTGGGTGATGAATATGAAGTGGATGAAGCAAAATTGGTGCTTACACTTGGGTTGCTTTGTTCACATCCTATTGCTTCAGCTAGGCCAACTATTTCTAGCATTGTGCAGTATTTAGATGGAGATTCTGAGGTTCCTCATAGCTTGTTGGATTTAATCAAGTTTAGAGACTTTGGTGGCCGGTCATCATTTCAAGCATATTCTTCAGCATCCTCTGATTTCCCTACTGGTTATACTTCTATTGCTACTATGACTTTTACAGAACCATTTGCCTCCTCTGGACGCTAA 2061 0.3974 MSIIIFMLCLFLNTANSDKNISSDDVGFMFHGGFFKLGAGNDQELKNSNMSRQVIHADGGLSEAWQVFYNVPLQFKNNSSNTSSSSSSVFSFSTNFIFVVIPTDPRFHGHGLAFAVSPTKFISEAQPNQYLGLFNASSSGKSSNHIVAIELDTDQDPQFLDIDDNHVGIDINGLESVNVSSAGYYDDRGRLRNLELASGEPFQVWVEYNSSDQKLSVTIHPINIPKPEIPLVTLNNLSSYFIEDMYVGFSSASGLNASHYILGWSFKMNGQAEQINLTRLPHIPGIVDPNKIGGRGIGYKKVLMAILSLVGVVTFLLLIYGLIMISRRRKFIQVLEDWQVLYGPHRFTYKDLFIATKGFREGQLLGRGGFGRVYKGMLPFSNFQVAVKRISHDSKQGMREFVAEIATIGRLRHPNLVRLLGYCRRQKELFLVYDFMPNGSLDKFLYHLPNNSILSWKQRFKIIKDVASALLYLHQQWVQVVIHRDIKPANVLIDNDMNARLGDFGLAKLWDHGIDPRTSRVAGTPGYIDPRIVQSGKSNTCTDIYSFGVFLLEIACGRRPIETKTSPEKVLMIEWVTECWEKGEICEAIDSRLGDEYEVDEAKLVLTLGLLCSHPIASARPTISSIVQYLDGDSEVPHSLLDLIKFRDFGGRSSFQAYSSASSDFPTGYTSIATMTFTEPFASSGR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1250 686 SMART serkin_6 359 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1250 686 PANTHER - 52 634 - -
Mibi09g1250 686 Gene3D Phosphorylase Kinase; domain 1 344 435 - -
Mibi09g1250 686 CDD lectin_legume_LecRK_Arcelin_ConA 98 270 IPR001220 GO:0030246
Mibi09g1250 686 ProSitePatterns Protein kinases ATP-binding region signature. 365 388 IPR017441 GO:0005524
Mibi09g1250 686 CDD STKc_IRAK 365 632 - -
Mibi09g1250 686 FunFam L-type lectin-domain containing receptor kinase S.4 436 642 - -
Mibi09g1250 686 Pfam Legume lectin domain 65 280 IPR001220 GO:0030246
Mibi09g1250 686 FunFam Lectin-domain containing receptor kinase A4.3 344 435 - -
Mibi09g1250 686 Pfam Protein kinase domain 360 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1250 686 ProSiteProfiles Protein kinase domain profile. 359 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1250 686 Gene3D Transferase(Phosphotransferase) domain 1 436 642 - -
Mibi09g1250 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 66 272 IPR013320 -
Mibi09g1250 686 Gene3D - 48 282 - -
Mibi09g1250 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Mibi09g1250 686 SUPERFAMILY Protein kinase-like (PK-like) 341 638 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1250 Mibi-ChrMibi09 28348370 28350572 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1250 66 686 Receptor kinase-like Gene Family AT4G29050 54.545 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi09g1250 Pkinase 3.7e-48 CL0016