Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1243 ATGGCGAAGTTATCACACAAGAACAATGCCAACAACAACAACGTTGGGGTCATCACTAACAATAGTACTAGTGTGGCCACCAAAGTGAAACGAACAAGAAGAAGTGTCCCAAGAGACTCTCCTCCTCAACGTAGCTCTATATACCGAGGTGTCACTAGGCACCGGTGGACTGGCCGGTATGAGGCTCACTTGTGGGACAAGAATTGTTGGAACGAGTCACAGAACAAGAAAGGGAGACAAGGTGCTTATGACGATGAAGAAGCAGCAGCACATGCTTATGATTTAGCAGCATTGAAGTACTGGGGTCAAGACACCATCCTTAACTTTCCGGTGGCAACGTATCTGAACGAATTGAAAGAAATGGAGGGACAATCCAGAGAAGAATATATTGGATCGTTAAGGAGGAAAAGCAGTGGTTTTTCCCGGGGAGTTTCGAAATACAGAGGTGTTGCCAGACATCATCATAATGGAAGATGGGAAGCTCGGATTGGCAGGGTTTTCGGCAACAAATATCTCTATCTTGGTACCTATGCTACTCAAGAAGAAGCTGCCACGGCTTATGATATGGCGGCTATAGAATACCGTGGACTTAACGCCGTCACCAACTTCGATCTCAGCCGTTACATAAAGTGGCTTAAGCCTAATTCCAACCCCAACACTACTATCAATCTTAGTGATCAACCTAACGGTGACCCTAACGGAAATATTGTTACCACCTTAACGGCATCATCAAACCCTAATCAAGACCATAGGTTTAGCTTCTTCCACAACAACCAACTTCCGGAATCGTTGGACATTAACGGCGGAGAAGAGGCCAAACTGGCTCAGCAATGTCCGGTGGGGGCCCCGGCGGCAACTGCCACGTCAGCACTAGGGCTGCTGCTTCAATCGTCCAAGTTCAAGGAAATGATGGAGATGACGTCCACGGTGGATTTGTCTGAGCCGGTGGCGACGCCGGAGTCCGAGATGCCGCCGCCACAGTGTAGGTTTCCGGACGATATTCAGACGTACTTTGAGTGTGAAGACTCTAATAGTAATGGGGAAGGTGATGAACATATTATGTTCAGTGAGCTCAACTCCTTTGTGCCTCCTCTGTTCCATTGTGATGACTTTGAAACCTGA 1122 0.4759 MAKLSHKNNANNNNVGVITNNSTSVATKVKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGQDTILNFPVATYLNELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNSNPNTTINLSDQPNGDPNGNIVTTLTASSNPNQDHRFSFFHNNQLPESLDINGGEEAKLAQQCPVGAPAATATSALGLLLQSSKFKEMMEMTSTVDLSEPVATPESEMPPPQCRFPDDIQTYFECEDSNSNGEGDEHIMFSELNSFVPPLFHCDDFET 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1243 373 ProSiteProfiles AP2/ERF domain profile. 47 110 IPR001471 GO:0003700|GO:0006355
Mibi09g1243 373 MobiDBLite consensus disorder prediction 1 30 - -
Mibi09g1243 373 SUPERFAMILY DNA-binding domain 145 206 IPR016177 GO:0003677
Mibi09g1243 373 FunFam AP2-like ethylene-responsive transcription factor 46 112 - -
Mibi09g1243 373 ProSiteProfiles AP2/ERF domain profile. 146 204 IPR001471 GO:0003700|GO:0006355
Mibi09g1243 373 SUPERFAMILY DNA-binding domain 46 111 IPR016177 GO:0003677
Mibi09g1243 373 SMART rav1_2 47 116 IPR001471 GO:0003700|GO:0006355
Mibi09g1243 373 SMART rav1_2 146 210 IPR001471 GO:0003700|GO:0006355
Mibi09g1243 373 CDD AP2 145 206 IPR001471 GO:0003700|GO:0006355
Mibi09g1243 373 MobiDBLite consensus disorder prediction 1 47 - -
Mibi09g1243 373 FunFam AP2-like ethylene-responsive transcription factor 145 206 - -
Mibi09g1243 373 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 20 263 - -
Mibi09g1243 373 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Mibi09g1243 373 PRINTS Ethylene responsive element binding protein signature 186 206 IPR001471 GO:0003700|GO:0006355
Mibi09g1243 373 Pfam AP2 domain 47 102 IPR001471 GO:0003700|GO:0006355
Mibi09g1243 373 Pfam AP2 domain 145 196 IPR001471 GO:0003700|GO:0006355
Mibi09g1243 373 Gene3D AP2/ERF domain 145 206 IPR036955 GO:0003700|GO:0006355
Mibi09g1243 373 Gene3D AP2/ERF domain 47 112 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1243 Mibi-ChrMibi09 28157479 28160194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1243 43 256 AP2-EREBP Transcription Factor Family AT5G57390 57.511 6.50e-87 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi09g1243 AP2 3.7e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1243 09 28157479 28160194 Mibi13g1057 13 13504917 13507765 CCT
Mibi09g1243 09 28157479 28160194 Mibi09g1243 09 28157479 28160194 ECH