Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1235 ATGGGTTTGTGTAGATTTTCCTTGTTTGCTTTTTTCTCTGTGGTCATTGTTCGTTTATTAGGAGCTCAAGGGGAAGAAAATGCCAACCTTGTGAATGATAAAAATTCTCTGATATCATTCATGGGACGCATTGTTTCTGACCCAAAGAACACTCTAGAGAGCTGGAAAGCTCGTGATATTCATGTCTGTAATTGGTCAGGCATAAGATGCAACAATGCAAGTGATAGAGTCATAGAGATTGATCTCAATGGGAAATCAATAGGAGGCACAATTTCCCCTGCTATTTCCAACCTCACTTCCTTGAGGATTCTTGATCTTTCTGAGAATTTCTTTGTGGGTCACATCCCAAAAGAGCTAGGCTTCTTAACTCAACTAGACCAACTCAGTTTAGCTTGGAATTTTCTTGAAGGAGAAATTCCAGCTGAGATGGGTTCACTTCATAACTTGTACTACCTTGACATGGGAAGCAACCAGCTTGAGGGTGAGATTCCAAAATCACTTTTCTGTAATGGGTCTTCCTCATTGAGGTATATAGACCTCTCTAACAATTCCTTAGGGGGGCATATCCCATTGAACAATGAGTGCATGCTTCTAGAGGTTAGCTTCCTTTTACTTTGGTCTAACCAGCTAGTAGGCCAAATTCCTTTAGCTCTTTCTAACTCCACACGGCTCAAATGGCTTGATTTGGAGTCAAATATGCTGAGTGGAGAGTTGCCACATGAGATTGTAAGTTGGCCTGAACTACAATTCCTTTATTTGTCAGATAATGACTTTGTTAGCCATGATGGAAACACCAACCTTGAGCCTTTCTTTGCATCTTTGTCAAATTTAACTAACCTTCAAGAACTTGAATTAGCAGAAAACAATCTTGGTGGGAAGCTTCCTTCTAATATTGGTGATCTTCCTAAAAGCCTTGTACAGCTTCACCTTGATGACAATCTCATTTATGGCCCTATTCCTCCTCAAATATCCAACCTTGTTAACCTGACCCTACTGAATTTTTCCAGTAATCTACTAAATGGATCTATCCCTCCTAGCCTATGCAAGATGGAAAAGCTTGAGAGAATCTTTTTGGCCAATAATTCACTGTCTGGTGAGATTCCTTCAGCATTTGGTGGCATTCAACATCTGGGCCTTCTAGATTTGTCAAGAAACAAGCTATCTGGTTCTATACCAGATAGTTTTGACAACCTTCCTCAGTTAAGAAGGCTTTTGCTGTATGAAAACCAGCTTTCCGGAACAATTCCGCCGAGTCTTGGAAAATGCGTCAATTTGGAGATTCTGGACCTGTCTAGAAACAGAATTTCCGGGGTGATTCCTACAGAAGTCGCCACATTGACTAGCTTGAAACTATACTTGAACTTATCAAGCAACAACTTGAATGGCCCTTTACCATTGGAGCTCAGCAAAATGGACATGGTTCTAGCTATTGATTTATCTAACAACAATCTCTCAGGCAGAATCCCACCTCAGCTTGAAAGCTGCATAGCTCTAGAATATCTTAACCTTTCTGGTAATTCCTTAGAGGGCCCTCTCCCTTTTTCATTAGGCCAATTGCCTTACATGAAGGCATTTGACGTCTCTTCAAATAGGTTAACTGGGGCAATACCAGAGTCTTTTCTGCTATCATCCGCTCTCAAGAAACTCAATTTCTCCTTCAACAAGTTCTCAGGGAATATACCAAACAAGGGAGCAATTTCATCTCTGACCATAGACTCTTTCCTAGGAAATGAAGCTCTATGTGGTTCCATAAAAGGGATGCAAAGCTGCCACAAGAAACACAACTATCATTTTTTTCTCCTTATAATTCCTGTGTTTCTATTTGCCACTCCCCTTGTGTGTATGTTTGGCTACCGATTGGTGCACAGGGTGAAATTTCGAAGGCGATTGGCAATGTTTGGCAGAAAAAACTATGAGAATGATGAAGAGGAAACAGAGGAGCTTAAGTACCCAAGCATTTCGTATAAACAACTTATTGAAGCAACTGGAGGGTTCAGTTCTTCAAGCTTAATTGGTTCAGGAAGATTTGGGCATGTCTACAAAGGAGTCCTTAGAGATAACACCAGAATAGCAGTGAAGGTGATAGATACCACCACAGCAGGTGAATTCTCTGGGAGTTTTAGAAGAGAGTTTCAAATTTTGAAAAGGACTAGGCACAGAAACTTGATAAGGATCATCACAATTTGCAGCAAGCCAGAGTTTAAGGCTCTTGTTCTTCCTCTAATGCCAAATGGCAGCCTTGAGAGGCACCTATATCCAAGTCATGGGTTGAGCCTCAGGTTGAATTTAGTTCAGGTGGTTAGGATTTGTAGTGATGTGGCTGAAGGAATGGCCTATTTGCACCATTACTCACCAGTAAGGGTGATCCACTGTGATTTGAAGCCAAGCAATATACTTCTTGATGATGACATGACAGCTTTGGTTACTGATTTTGGAATTGCAAGGCTTGTAAAAGGCGATGAGAGTATGGCCTCAAATAATAGCTCGGCATCTTTCAGTTCAACACATGGCTTGTTATGTGGTTCTCTTGGCTATATAGCCCCTGAGTATGGAATGGGGAAAAAAGCATCAACCCAAGGTGACGTGTATAGTTTTGGAGTATTACTACTAGAAATAGTGACAGGGAGGCCTCCCACAGATGTTCTCGTCCATGAAGGCTCAAGTTTGCATGAGTGGGTGAAGAGACAATACCCATACAAGCTAGACAACATTGTTGACAAGGCATTACAAAGGTTGTCACATTATTATTCTGAGCAACATGAAAGAAAAATCTGGCAAGATGTTGTACTTGAACTCATAGAACTGGGACTTCTCTGTACACAGCACAATCCCCTTACAAGGCCAAGCATGCTTGATTTGGCTCAAGAAATGGGCAGGTTGAAGGATTACTTGTGTAATAAAAATCCATCATCCTCATTGCTAATTGATGAAGCTGTCAACTCTAAGGTTGATGATTCATTTTGCAGTGAAGATAATTTACTTGAAAAATAA 2991 0.4086 MGLCRFSLFAFFSVVIVRLLGAQGEENANLVNDKNSLISFMGRIVSDPKNTLESWKARDIHVCNWSGIRCNNASDRVIEIDLNGKSIGGTISPAISNLTSLRILDLSENFFVGHIPKELGFLTQLDQLSLAWNFLEGEIPAEMGSLHNLYYLDMGSNQLEGEIPKSLFCNGSSSLRYIDLSNNSLGGHIPLNNECMLLEVSFLLLWSNQLVGQIPLALSNSTRLKWLDLESNMLSGELPHEIVSWPELQFLYLSDNDFVSHDGNTNLEPFFASLSNLTNLQELELAENNLGGKLPSNIGDLPKSLVQLHLDDNLIYGPIPPQISNLVNLTLLNFSSNLLNGSIPPSLCKMEKLERIFLANNSLSGEIPSAFGGIQHLGLLDLSRNKLSGSIPDSFDNLPQLRRLLLYENQLSGTIPPSLGKCVNLEILDLSRNRISGVIPTEVATLTSLKLYLNLSSNNLNGPLPLELSKMDMVLAIDLSNNNLSGRIPPQLESCIALEYLNLSGNSLEGPLPFSLGQLPYMKAFDVSSNRLTGAIPESFLLSSALKKLNFSFNKFSGNIPNKGAISSLTIDSFLGNEALCGSIKGMQSCHKKHNYHFFLLIIPVFLFATPLVCMFGYRLVHRVKFRRRLAMFGRKNYENDEEETEELKYPSISYKQLIEATGGFSSSSLIGSGRFGHVYKGVLRDNTRIAVKVIDTTTAGEFSGSFRREFQILKRTRHRNLIRIITICSKPEFKALVLPLMPNGSLERHLYPSHGLSLRLNLVQVVRICSDVAEGMAYLHHYSPVRVIHCDLKPSNILLDDDMTALVTDFGIARLVKGDESMASNNSSASFSSTHGLLCGSLGYIAPEYGMGKKASTQGDVYSFGVLLLEIVTGRPPTDVLVHEGSSLHEWVKRQYPYKLDNIVDKALQRLSHYYSEQHERKIWQDVVLELIELGLLCTQHNPLTRPSMLDLAQEMGRLKDYLCNKNPSSSLLIDEAVNSKVDDSFCSEDNLLEK 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1235 996 Pfam Leucine rich repeat 352 411 IPR001611 GO:0005515
Mibi09g1235 996 Gene3D Phosphorylase Kinase; domain 1 629 740 - -
Mibi09g1235 996 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Mibi09g1235 996 FunFam Leucine-rich repeat receptor-like protein kinase TDR 271 592 - -
Mibi09g1235 996 ProSiteProfiles Leucine-rich repeat profile. 424 445 IPR001611 GO:0005515
Mibi09g1235 996 Pfam Protein kinase domain 667 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1235 996 ProSiteProfiles Protein kinase domain profile. 665 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1235 996 SMART serkin_6 665 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1235 996 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 742 969 - -
Mibi09g1235 996 CDD STKc_IRAK 671 960 - -
Mibi09g1235 996 Gene3D Ribonuclease Inhibitor 198 264 IPR032675 -
Mibi09g1235 996 Pfam Leucine Rich Repeat 498 517 IPR001611 GO:0005515
Mibi09g1235 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Mibi09g1235 996 SMART LRR_typ_2 98 122 IPR003591 -
Mibi09g1235 996 SMART LRR_typ_2 326 350 IPR003591 -
Mibi09g1235 996 SMART LRR_typ_2 374 397 IPR003591 -
Mibi09g1235 996 SMART LRR_typ_2 146 170 IPR003591 -
Mibi09g1235 996 SMART LRR_typ_2 398 422 IPR003591 -
Mibi09g1235 996 SMART LRR_typ_2 277 301 IPR003591 -
Mibi09g1235 996 Gene3D Ribonuclease Inhibitor 265 598 IPR032675 -
Mibi09g1235 996 SUPERFAMILY L domain-like 37 260 - -
Mibi09g1235 996 Gene3D Ribonuclease Inhibitor 30 197 IPR032675 -
Mibi09g1235 996 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 201 955 - -
Mibi09g1235 996 SUPERFAMILY L domain-like 332 582 - -
Mibi09g1235 996 Gene3D Transferase(Phosphotransferase) domain 1 742 977 - -
Mibi09g1235 996 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Mibi09g1235 996 SUPERFAMILY L domain-like 271 363 - -
Mibi09g1235 996 SUPERFAMILY Protein kinase-like (PK-like) 644 955 IPR011009 -
Mibi09g1235 996 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1235 Mibi-ChrMibi09 27991692 27995504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1235 33 962 Receptor kinase-like Gene Family AT3G47570 34.698 1.20e-159 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mibi09g1235 Pkinase 4.4e-44 CL0016