Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1229 ATGGAAGCTAGCACTGGGCTTTTTGCAGGCTCTCACAACAGCAACGACCTTGTGGTCATACAAGGACCTGAAGAAGAGCCTAAGCCTGTGAAGAACTTAGATGGTCAACTATGTGAGATATGTGGTGATTCTGTGGGGTACACCGTGGAAGGAGATTTGTTCGTGGCCTGTGAAGAGTGTGGTTTCCCTGTGTGCAGGCCATGTTATGAGTATGAAAGGAGGGAAGGTACTCAAAATTGCCCTCAGTGCCAGACCAGATACAAGAGAATCAAAGGAAGCCCAAGAGTTGAGGGAGATGAAGATGAAGATGGCGTGGATGATATTGAACATGAGTTCAAAATGGAAGAAGAAAAGTACAAACTCATGATAGGCCGGGGAAAAGATGAAGATGGTGCTAAATTACCGGTGGTAATAGCCAAGGTGAATGGAGAGATTCCCATTATTGAAGAATCTGGAAATGCGAAGTTGAATGAAAAGACGGAGATAACAGAAGACTGGAAGATGCATCAAGGCAATCTGTGGCCTGAAACTGATGCATCAGTTGATCCTGAAAAGGCCATGAGAGATGAAGCTAGACAGCCACTCTCAAGGAAAGTGGCAATACCATCCGGCAGACTCAGCCCTTACAGGATGATGGTCGCAGCTCGGCTTATGATTCTTATATTGTTCCTTCAGTACAGAGTCCTACACCCAGTGCCTGACGCAGTTGGACTCTGGCTTACATCTGTAATATGTGAAATATGGCTTACATTGTCATGGATAATAGATCAGATTCCAAAATGGTTTCCTATTGACCGAGAGACATACCTTGATCGACTTTCACTTAGGTTTGAACCAGAGAACAAGCCAGATTTGTTTCCTCCAGTAGATGTCTTTGTCACTACTGTGGATCCAATCAAGGAACCACCACTACTTACGGCTAATACCGTTCTTTCAATCTTGGCCATGGATTACCCTGCTAGTAAAATCTCATGCTATGTTTCTGATGACGGAGCTTCCCTGCTCACCTTTGAAGCTCTCCAAGAAACTGCAGAGTTTGCAAGGAAGTGGGTGCCCTTCTGCAAAAAATATTCCATAGAGCCTCGAGCACCAGAGAATTACTTCTCTGAGAAGATTGATTTTCTAAAGGATAAGGTCCAGTCAACATATGTCAGAGACCGCCGTACCATGAAGAGAGAATATGAAGAATTCAAGGTCAGGATAAATTCACTTGTGGCTAAATCCATGAGAGTTCCCCAAGAAGGGTGGACTATGCAAGATGGGACACCATGGCCTGGAAACAATACCAATGATCACCCAGGTATGATACAAATTCTTCTTGCTCGGAGTGGAGGCATTCAAGGAAATGAACTTCCCTGTCTTGTCTACCTATCTCGTGAGAAAAGGCCAGGATTTCAACACCATGGCAAAGCCGGTGCCTTGAATGCATTGCTTCGGGTATCTGCATTGTTAAGCAATGCTCCTTTTGTGCTGAACTTGGATTGCAATCACTATGTGAACAATAGCAAGGCTGTGAGAGAGGCCATGTGTTTCTTCATGGAACTACAATTTGGAAAGAGCATATGCTTTGTCCAGTTCCCGTTAAGATTTGACAGCCTTGATACGCATGATCGTTATGCAAACAGAAATACTGTTTTATTTGATATAAACTTGAGGTGCCTCGATGGAATCCAAGGACCTATTTATATTGGTTCAGGATGTATCTTCCGGAGGAAAGCTTTAAATGGCAGTGATCCTCCGAAGACTTCAAAGCGCCCTAAAATGGAAGGTTGTGGATGCTGTCCTTGTTTTGGATCACGCAAGAAGCTACAAGTGCACTCTAAGCATGATGATGGCAATGAAGATGAGCCAACCATGACAGGAACAGATGAAGACAAACAGCTTTTAACATCAGAGACGAATTTTGAAAATAAATTTGGGAAATCTGCAGTTTTTGTGAACTCTTCCATAAATGAAGAGGGTGGTACTCCTTCTACCTCTAATCAGGCAGCCTTGCTTAAAGAAGCCATCCATGTCATGAGTAGCCGCTATGAAGATAGGACCCTATGGGGATATGAGGTAGGTTGGAACTATGGATCTACATCATCAGATACTCTGACAAGTTTTAAAATGCACTCTCTTGGTTGGAGATCTGTGTACTGCATGCCAGAAAGACCTGCTTTCCGGGGTACTGCTCCTATCAACCTTTCAGATCGACTCAGTCAAGTGCTTAGATGGGCAGTTGGATCACTTGAAATTCTTTTCAGCCGCCACTGCCCAATATGGTACACTTTAGGAGAAGGAAAACTCAAGGGACTTCAAAGAATTGCCTACATCAATAGCACAGTCTACCCTTTCAGCTCAATACCCCTTCTAGTATATTGTCTCCTTCCAGCCATCTGCCTGCTCACAGACAAGTTCATCACACCATCGATAAGTACCTTTGCAAGTCTTCTCTTTATTGCACTGTTCATATCAGTCTTTGCATCAAGCATTCTCGAGTTGAGATGGAGTGGAGTTACTCTTGAGGAGTGGTGGAGAAATGAGCAATTCTGGGTTATCGGCAGCATCTCAACGCACCTCTTTGCAATAGTGAGAAACTTTCTGAAGGGTGTGTCTAAAGTTGATATTAACTTCAGTGTTGTATCGAAAGTACCAGATGATGGGGAATTCCATGACCTGTACACCTTTAGATGGACAGCATTGCTAATACCTCCAACCACTATCATGATTATCAACCTTGTTGGTATTGTAGCTGGGTTTACAGATGCCATAAACAGTGGTGGGCATTCTTGGGGAGCATTACTTGGGAAACTCTTCTTCTCCTTTTGGGTTCTGGTCCACCTTTACCCATTCCTCAAAGGAATGATGGGTAAACAAAACCGAACACCAACCCTTGTTATCATATGGTCAGTGCTTTTGGCTTCTATCTTCTCCTTGGTTTGGGTAAGAATTGATCCTTTTGTGTTGAAAACAGAAGGACCGGACGTTAAGCAGTGTGGAATCAGTTGCTGA 2994 0.4369 MEASTGLFAGSHNSNDLVVIQGPEEEPKPVKNLDGQLCEICGDSVGYTVEGDLFVACEECGFPVCRPCYEYERREGTQNCPQCQTRYKRIKGSPRVEGDEDEDGVDDIEHEFKMEEEKYKLMIGRGKDEDGAKLPVVIAKVNGEIPIIEESGNAKLNEKTEITEDWKMHQGNLWPETDASVDPEKAMRDEARQPLSRKVAIPSGRLSPYRMMVAARLMILILFLQYRVLHPVPDAVGLWLTSVICEIWLTLSWIIDQIPKWFPIDRETYLDRLSLRFEPENKPDLFPPVDVFVTTVDPIKEPPLLTANTVLSILAMDYPASKISCYVSDDGASLLTFEALQETAEFARKWVPFCKKYSIEPRAPENYFSEKIDFLKDKVQSTYVRDRRTMKREYEEFKVRINSLVAKSMRVPQEGWTMQDGTPWPGNNTNDHPGMIQILLARSGGIQGNELPCLVYLSREKRPGFQHHGKAGALNALLRVSALLSNAPFVLNLDCNHYVNNSKAVREAMCFFMELQFGKSICFVQFPLRFDSLDTHDRYANRNTVLFDINLRCLDGIQGPIYIGSGCIFRRKALNGSDPPKTSKRPKMEGCGCCPCFGSRKKLQVHSKHDDGNEDEPTMTGTDEDKQLLTSETNFENKFGKSAVFVNSSINEEGGTPSTSNQAALLKEAIHVMSSRYEDRTLWGYEVGWNYGSTSSDTLTSFKMHSLGWRSVYCMPERPAFRGTAPINLSDRLSQVLRWAVGSLEILFSRHCPIWYTLGEGKLKGLQRIAYINSTVYPFSSIPLLVYCLLPAICLLTDKFITPSISTFASLLFIALFISVFASSILELRWSGVTLEEWWRNEQFWVIGSISTHLFAIVRNFLKGVSKVDINFSVVSKVPDDGEFHDLYTFRWTALLIPPTTIMIINLVGIVAGFTDAINSGGHSWGALLGKLFFSFWVLVHLYPFLKGMMGKQNRTPTLVIIWSVLLASIFSLVWVRIDPFVLKTEGPDVKQCGISC 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1229 997 Pfam Cellulose synthase 289 991 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mibi09g1229 997 FunFam Cellulose synthase 21 111 - -
Mibi09g1229 997 Pfam Zinc-binding RING-finger 28 104 IPR027934 -
Mibi09g1229 997 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 277 380 IPR029044 -
Mibi09g1229 997 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 426 578 IPR029044 -
Mibi09g1229 997 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 110 IPR013083 -
Mibi09g1229 997 ProSiteProfiles Zinc finger RING-type profile. 38 84 IPR001841 -
Mibi09g1229 997 CDD mRING-HC-C4C4_CesA_plant 36 86 - -
Mibi09g1229 997 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 192 964 - -
Mibi09g1229 997 SUPERFAMILY Nucleotide-diphospho-sugar transferases 301 818 IPR029044 -
Mibi09g1229 997 SUPERFAMILY RING/U-box 23 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1229 Mibi-ChrMibi09 27735074 27740518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1229 1 997 Cell Wall Biosynthesis AT5G17420 66.990 0.0 1437