Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1228 ATGGAAGCCAGCGCCGGACTTGTCGCCGGTTCTCACAACCGCAACGAGCTCGTTGTCATCCACGGCCATGAAGAGCCAAAGCCTTTGAAGAATTTGGATGGGCAAGTGTGTGAGATATGTGGCGATGACGTTGGTCTCACTGTGGATGGCGACTTGTTTGTGGCATGTAATGAGTGTGGTTTCCCGGTTTGCCGTCCTTGTTATGAATATGAACGTAGAGAAGGCAGCCAACTTTGCCCTCAGTGCAAGACCAGATACAAGCGTCTCAAAGGAAGTCCAAGGGTGGCGGGAGACGAAGATGAGGAGGATGTGGATGACATTGAACATGAATTCAAGATCACTGATGAGAAGAACAAGCATAACCAAATGGCAGAGGCGATGCTTCATGGGAAGATGAGCTATGGAAGAGGCCATGAAGATGACGACAATGCTCAATTCCCTCCTGTCATCACTGGAAACCTCTCCCGTCCAGTGAGCGGAGAAATCTCAATATCATCTCATGCTTATGGAGATCAGATGCTTTCTTCTTCTCTCCACAAACGTGTTCATCCTTATCCAGTTTCTGAACCTGGAAGTGTGAGAGGGGAGGAGAAGTACTACGAGGATGGATGGAAAGAGAGAATGGAGGACTGGAAACTGCACCAAGGAAACTTGGGACCTGAACCTGATGAAGATCCAGATGCTACCTTGTTGGATGAAGCGAGGCAGCCACTGTCAAGGAAAGTGCCAATAGCATCAAGCAAGATAAATCCATACAGAATGGTGATAGTGGCACGTCTTGTGATTCTGGCATTCTTCCTCAGATATAGAATTCTGAATCCTGTTCATGACGCCTTTGGCCTCTGGCTCACTTCCATTATCTGTGAAATCTGGTTTGCTTTCTCATGGATCCTCGATCAGTTCCCTAAATGGTTCCCCATTGATCGTGAGACCTACCTTGACCGTCTCTCCATCAGGTATGAGAGGGAAGGGGAGCCTAACATGTTGGCACCGGTGGATGTGTTTGTGAGTACGGTGGATCCAATGAAGGAACCACCGTTGGTGACGGCAAACACCATTCTATCCATATTGGCCATGGATTATCCAGTGGATAAGACATCATGTTACATTTCTGATGATGGAGCTTCCATGTGTACCTTCGAGGCACTTTCAGAAACTGCAGAATTTGCAAGGAAGTGGGTCCCATTTTGTAAGAAATTTGCCATTGAGCCTCGAGCTCCTGAGATGTACTTCTCTGAGAAGATCGATTACTTGAAGGATAAGGTTCAGCCCACCTTTGTGAAGGAACGTAGAGCTATGAAGAGAGAATACGAAGAATTCAAGGTTAGAGTGAACGCACTAGTGGCAAAAGCCCAGAAAGTCCCAGCTGGAGGATGGATTATGCAGGATGGGACTCCATGGCCAGGAAACAACACAAAGGACCATCCAGGAATGATCCAAGTGTTTCTTGGTCACAGTGGAGGCTGTGACACTGATGGCAACCTTCTTCCTCGTCTGGTTTATGTGTCACGTGAGAAAAGGCCTGGTTTTGCTCACCACAAGAAAGCTGGTGCCATGAATGCTCTTGTTCGAGTTTCTGCTGTTCTCACTAATGCCCCTTTCATGCTCAACTTGGATTGTGATCACTATCTTAATAACAGTAAGGCTGTGAGAGAGGCCATGTGCTTCTTGATGGACCCCCAGACTGGAAAGAAAGTTTGCTATGTTCAATTCCCTCAGAGATTTGATGGCATTGATAGGAATGATCGTTATGCCAACAGGAACACTGTCTTCTTTGATATTAACATGAAGGGTCTAGATGGTATTCAGGGTCCTGTGTATGTGGGGACAGGATGTGTGTTCAGGAGGCAAGCTTTGTACGGATACAATCCTCCAAAGGGTCCTAAACGCCCCAAAATGGTAAGTTGTGATTGCTGTCCATGTTTTGGACGCCGCAGAAAGGAAAAGTATGCTAAGGATGGTGCAAATGCTGAGTCTGCAATGTTACAACAAGGAATGGAAGATGATAAAGAGATGCTCATGTCTCAGATGAATTTTGAAAAGAAATTTGGGCAATCATCTATTTTTGTGACTTCAACTTTGATGGAAGAAGGTGGTGTGCCTCCTTCCTCAAGCCCAGCAGCCCTGCTCAAAGAAGCTATTCATGTCATAAGCTGTGGCTACGAGGATAAAACCGAATGGGGAACCGAGCTGGGTTGGATCTATGGATCTATTACTGAGGATATCCTAACAGGTTTCAAGATGCATTGCCGTGGTTGGAGGTCTATTTACTGCATGCCAAAGAGACCTGCATTCAAGGGTACAGCTCCAATCAACTTGTCAGATAGGCTGAACCAGGTGCTTCGGTGGGCACTGGGTTCAATTGAGATCTTCTTCAGTCCCCATTGCCCTGCATGGTATGGCTACAAGGGTGGCAACAAGCTCAAGTGGCTCGAGCGATTCGCCTATGTCAACACCACTGTCTACCCCTTCACCTCCCTTCCCCTACTTGCTTACTGTATTCTTCCTGCTATTTGCTTGCTCACTGACAAGTTCATCATGCCACCGATAAGCACTTTTGCCGGTTTGTACTTCGTTGCCCTGTTCTCTTCCATCATAGCAACGGGCCTGCTTGAATTGAAATGGAGTGGAGTAAGCATAGAGGAATGGTGGAGAAATGAGCAATTCTGGGTCATTGGTGGTGTATCAGCACATCTCTTTGCTGTCATACAAGGTCTTCTGAAGGTGTTAGCTGGAATTGATACAAACTTCACTGTTACATCAAAAGCAGCAGATGATGAGGAATTTGGAGAATTATACACCTTTAAATGGACCACTCTCCTAATTCCACCAACCACAATACTTATCATCAATATTGTTGGTGTTGTTGCTGGAATCTCAGATGCAATCAACAACGGCTACCAATCTTGGGGACCCCTATTTGGAAAGCTCTTCTTTTCCTTCTGGGTCATTCTTCATCTCTACCCATTCCTTAAAGGTTTGATGGGAAGACAAAACAGAACACCCACCATAGTTGTGATATGGTCAATTCTCTTGGCTTCTATTTTCTCTCTTCTTTGGGTGAGAATTGACCCATTTGTGATGAAAACTAAGGGGCCTGACACCAAGATGTGTGGAATCAACTGCTGA 3129 0.4605 MEASAGLVAGSHNRNELVVIHGHEEPKPLKNLDGQVCEICGDDVGLTVDGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVAGDEDEEDVDDIEHEFKITDEKNKHNQMAEAMLHGKMSYGRGHEDDDNAQFPPVITGNLSRPVSGEISISSHAYGDQMLSSSLHKRVHPYPVSEPGSVRGEEKYYEDGWKERMEDWKLHQGNLGPEPDEDPDATLLDEARQPLSRKVPIASSKINPYRMVIVARLVILAFFLRYRILNPVHDAFGLWLTSIICEIWFAFSWILDQFPKWFPIDRETYLDRLSIRYEREGEPNMLAPVDVFVSTVDPMKEPPLVTANTILSILAMDYPVDKTSCYISDDGASMCTFEALSETAEFARKWVPFCKKFAIEPRAPEMYFSEKIDYLKDKVQPTFVKERRAMKREYEEFKVRVNALVAKAQKVPAGGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGCDTDGNLLPRLVYVSREKRPGFAHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYLNNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDRNDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFGRRRKEKYAKDGANAESAMLQQGMEDDKEMLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGTAPINLSDRLNQVLRWALGSIEIFFSPHCPAWYGYKGGNKLKWLERFAYVNTTVYPFTSLPLLAYCILPAICLLTDKFIMPPISTFAGLYFVALFSSIIATGLLELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKAADDEEFGELYTFKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVILHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLLWVRIDPFVMKTKGPDTKMCGINC 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1228 1042 SUPERFAMILY Nucleotide-diphospho-sugar transferases 345 822 IPR029044 -
Mibi09g1228 1042 FunFam Cellulose synthase 449 623 - -
Mibi09g1228 1042 SUPERFAMILY RING/U-box 21 105 - -
Mibi09g1228 1042 CDD mRING-HC-C4C4_CesA_plant 35 85 - -
Mibi09g1228 1042 Coils Coil 430 450 - -
Mibi09g1228 1042 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 493 623 IPR029044 -
Mibi09g1228 1042 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 235 1009 - -
Mibi09g1228 1042 Pfam Cellulose synthase 332 1036 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mibi09g1228 1042 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 109 IPR013083 -
Mibi09g1228 1042 FunFam Cellulose synthase 19 110 - -
Mibi09g1228 1042 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Mibi09g1228 1042 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1228 Mibi-ChrMibi09 27725345 27732827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1228 1 1042 Cell Wall Biosynthesis AT5G17420 84.851 0.0 1827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1228 09 27725345 27732827 Mibi09g1228 09 27725345 27732827 ECH