Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1220 ATGGAGTTCAAATTCCTCGGCAATGATCTCAAGTCACCGCATTTTCATTCCCCTTTTCCGATTAAAACCCACTTCTCCGTCGAACCCTCCTCCTTGTTGCAAGGTGGTTTTAGGAGTGTTTTTCCTGTGACGAACACTGAGCAAATACTGAATCCAAACGTAACAGGATGTGAAGATATACTAAGGAAGTTGGAGAAAGAGCGAATTAAGTTAGAGATAAGGTCCAGTGAGATAGCGAGGAGGATGATGCTGGAGAGAGAAGTGGCTCTCAGAAGGAGTTTGGGGGAAAATGTCTTGCTTAATGAGCAAGTAGCTTTAGGGTTGAATCACAGACCCAACCCAGTTCCTCCTTGTGATGATCCCAGACTTAAACCTGATCCTAAGAGTAACAAGAACAAATTGATCATGCTGGCTAAGCCAAACCCAGATATTTATAGAGAAAAGCGGAAAACTGCAATGAATGATGATGATGATGATGATGAGACGGAGCATTCTCCGATTGTTGTGAAGAAAAAACTGAAGGATGACTGGAGCTGTGCGCTATGTCGTGTTAGTGTCACAAGTGAGAAAGCTTTTAATGAACACATTCAAGGTAAAAAGCACAAAGCCAGGGCAGAGAGAATTCAGAACATCGGTACAAGTGCTAGCCCATCATCTTCATCGAAGAACAGCGAACAGTCTCCTACCATTTCAGATGTGGAAGCAAAGGCTAATGCTCAAGTTCAACCTGAAGGTGTGGAAGCAATAGCAGATGCTCAAGTTCAACCTGAAGTGACAAAGGAAAACATAAATCGGACAGTGGTAGGCAAAGATCATGTGGAACTCAAAATCGAATATGATGAGATTGCGGGGAAAGTTCAGATTACAGAAGGGTCAGGAAAGCAAAATGGGACTGAAACAGAACAGGCAAGTAAAATAAAAAATGATGCAGTGAACAAAGGATACAAGTTTTGGTGTGAACTTTGCCAAGTTGGATGTTGCTCTATGGTTGTGATGGAGAACCATAAGAGGGGGAAAAAACACATCAACCGATTAAAGCGATTGCGTCAAAATGATAAGAGTGCTCCTCCCATACCAGAAGCTACTCCATTATTGACAAAAGATGCAGATGGTTGTCCAAATGAATGA 1128 0.4229 MEFKFLGNDLKSPHFHSPFPIKTHFSVEPSSLLQGGFRSVFPVTNTEQILNPNVTGCEDILRKLEKERIKLEIRSSEIARRMMLEREVALRRSLGENVLLNEQVALGLNHRPNPVPPCDDPRLKPDPKSNKNKLIMLAKPNPDIYREKRKTAMNDDDDDDETEHSPIVVKKKLKDDWSCALCRVSVTSEKAFNEHIQGKKHKARAERIQNIGTSASPSSSSKNSEQSPTISDVEAKANAQVQPEGVEAIADAQVQPEVTKENINRTVVGKDHVELKIEYDEIAGKVQITEGSGKQNGTETEQASKIKNDAVNKGYKFWCELCQVGCCSMVVMENHKRGKKHINRLKRLRQNDKSAPPIPEATPLLTKDADGCPNE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1220 375 SUPERFAMILY beta-beta-alpha zinc fingers 171 208 IPR036236 -
Mibi09g1220 375 MobiDBLite consensus disorder prediction 211 231 - -
Mibi09g1220 375 Pfam Zinc-finger of C2H2 type 177 201 - -
Mibi09g1220 375 Pfam Zinc-finger of C2H2 type 317 341 - -
Mibi09g1220 375 MobiDBLite consensus disorder prediction 110 133 - -
Mibi09g1220 375 Gene3D Classic Zinc Finger 293 349 - -
Mibi09g1220 375 Gene3D Classic Zinc Finger 169 214 - -
Mibi09g1220 375 MobiDBLite consensus disorder prediction 345 375 - -
Mibi09g1220 375 SMART ZnF_U1_5 314 348 IPR003604 GO:0003676|GO:0008270
Mibi09g1220 375 SMART ZnF_U1_5 174 208 IPR003604 GO:0003676|GO:0008270
Mibi09g1220 375 ProSitePatterns Zinc finger C2H2 type domain signature. 179 201 IPR013087 -
Mibi09g1220 375 SUPERFAMILY beta-beta-alpha zinc fingers 317 350 IPR036236 -
Mibi09g1220 375 Coils Coil 61 81 - -
Mibi09g1220 375 PANTHER OS06G0651300 PROTEIN-RELATED 58 355 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1220 176 345 C2H2 Transcription Factor Family AT5G61190 23.563 6.27e-08 52.8